Pseudomonas sp. HPB0071, HMPREF1487_05088

Gene Feature Overview

Strain	Pseudomonas sp. HPB0071 GCF_000478505.2|latest
Locus Tag	HMPREF1487_05088
NCBI Locus Tag	HMPREF1487_RS03955
Name
Replicon	scaffold_1
Genomic location	778686 - 780707 (+ strand)

Cross-References

RefSeq	WP_010795302.1
GI	498494566
INSDC	ENA36908.1
NCBI Locus Tag	HMPREF1487_RS03955
NCBI Old Locus Tag	HMPREF1487_05088
UniParc	UPI0002C97B96
UniProtKB Acc	N2JSB9
UniProtKB ID	N2JSB9_9PSED
UniRef100	UniRef100_N2JSB9
UniRef50	UniRef50_Q4K7C5
UniRef90	UniRef90_N2JSB9

Product

Feature Type	CDS
Coding Frame	1
Product Name	PAS domain S-box protein
Synonyms
Evidence for Translation
Charge (pH 7)	-10.01
Kyte-Doolittle Hydrophobicity Value	-0.163
Molecular Weight (kDa)	75.3
Isoelectric Point (pI)	5.70

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003988 (532 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: HMPREF1487_05088 Search term: PAS domain S-box protein

Human Homologs

References