Pseudomonas sp. VLB120, PVLB_25030

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_25030
Name
Replicon chromosome
Genomic location 5497272 - 5497952 (- strand)

Cross-References

RefSeq YP_008765912.1
GI 557225697
Entrez 17499645
INSDC AGZ37785.1
NCBI Locus Tag PVLB_25030
UniParc UPI0003C08618
UniProtKB Acc U5VPU0
UniProtKB ID U5VPU0_9PSED
UniRef100 UniRef100_U5VPU0
UniRef50 UniRef50_Q12EY8
UniRef90 UniRef90_A5WB02

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.08
Kyte-Doolittle Hydrophobicity Value -0.036
Molecular Weight (kDa) 25.3
Isoelectric Point (pI) 7.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 475 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004890 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_25030

Human Homologs

References

No references are associated with this feature.