Strain | Pseudomonas sp. VLB120, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ATTGCGGGGGCTACGGCCACGGTGGCGTCGGTCGCCAGCACCAGGGTAGTCAGCAGGTCATCGGCCATGCCCTGGGCCATGCGCGCCATGAGGTCGGCGG TGGCGGGGGCGATGAGCACGAGGTCGGCCCACTTGGCCAGTTCGATATGGCCCATGGCCGCTTCAGCGGCAGGGTCGAGCAAATCCATGTGCACGGGGTG CCCGGAGAGCGCTTGCAAGGTCAGCGGGGTGATGAACTCGGCACCACCACGGGTCATGACGACGCGCACCTGCGCGCCGTGCTCCAGGAGTCGGCGAATC AGTTCGGCACTCTTGTAGGCGGCGATGCCGCCTCCCACGCCGAGAACGATGCGCTTGCGATACAGCCGCTGCATAGGCTTGCCTTTTTCCAGTGAAAGCG GGCGGCGACGAAGACTGCCTGCGGCAGAACGTCGCATGTACGAGGCGAAATAGATTAACACAGGGCCGAAACGCGCCGCAGTAGGTTGCCAGGAGGGGGC
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DNA Sequence for Gene |
>PVLB_25030
ATGAACATGAGGGAGTGGCCGACTGAAGAGCGGCCGAGGGAGAAGTTGCTGCAACGGGGAGTGGGTAGCTTATCGGATGCTGAGCTATTGGCGGTGTTCC TTGGCTCTGGTGTTCGCGGTCGGAATGTTGTGGAGCTGGCGCGAGGGCTGTTGGTGAAATTCGGAAGTCTGCGCCAGTTGCTTGAGGCCGATAGAGAGGC ATTCATGGCTGAACTTGGGCTTGGGCCAGTGAAGTACAGTCAGTTGCAGGCGCTTCTGGAAATCGGGCGAAGGCATCTGGCTACGGCTATCGAGCGCGAG TCGGCCATGGAGAGCCCATCGGCGGTTCGGCGTTATCTGAAGGCCATGTTGCGCCATGAGGCCAGTGAAGTGTTCGGTTGCCTGTTCTTGGATACCAAGC ATCGGCCACTGGCCTTCGAGATCTTGTTCAGGGGCACGATAGACCGGGCCAGCGTCTACCCGCGTGAAGTGGTCCGGCGGGCGTTGCTGCATAACGCCGC GGCCTTGATTCTGTGCCACAACCATCCTTCGGGTAACTGCGAACCGAGCCAGGACGATGTGCACCTGACGCTATCGCTGAAGCGGGGGTTGGCGTTGATC GATGTGCGGGTGCTGGACCACATCATCATCGGCGACGGGGAGCCGCTGTCGATGGTCGAGCATGGGTGGATCGTGGCTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGGGGAAGTGCTTGTCTTGCTGGAGGGGGAGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCATCGCGAGCAAGGCTCGCTCCTACGATTGTTTTTGGCC AGTAACGCCAAGGGCAAATGCACGACCGCCTTGTTTGTACGACGTGGATTGGGCCAAGTCACCCAAGCGGTCGCGCGCAAATCCTACAGAAATAATTGGC CCGAAACAGGCGTAGGAGCGAGCCTTGCTCGCGATGCGCCGCACGGGCGGCGCTCGATTTCACAGGCTCTCCCCCTCAAGTCAGCCGCGGAATCAGCGGT TCACCGAAACCTTGCTGAAATCAAGTCGCCCGAACGGGCTGACCTGATACCCCTCGACGCCCTGGCGCAGCAGTGTCGTCGCCGTCGGGTGCGCCAGCGG TACCCACAGCGCCTGCTGCTGAATCAGCGTCTGCGCCTGCTGGTAAAGCCGGCTGCGCACGCTCTGGTCGTTGGTGGTGCGTCCAGCGCTGATCAACTGG
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Amino Acid Sequence |
>hypothetical protein
MNMREWPTEERPREKLLQRGVGSLSDAELLAVFLGSGVRGRNVVELARGLLVKFGSLRQLLEADREAFMAELGLGPVKYSQLQALLEIGRRHLATAIERE SAMESPSAVRRYLKAMLRHEASEVFGCLFLDTKHRPLAFEILFRGTIDRASVYPREVVRRALLHNAAALILCHNHPSGNCEPSQDDVHLTLSLKRGLALI DVRVLDHIIIGDGEPLSMVEHGWIVA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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