Pseudomonas sp. VLB120, PVLB_23585

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_23585
Name
Replicon chromosome
Genomic location 5199838 - 5201187 (+ strand)

Cross-References

RefSeq YP_008765623.1
GI 557225408
Entrez 17499352
INSDC AGZ37496.1
NCBI Locus Tag PVLB_23585
UniParc UPI0003C07825
UniProtKB Acc U5VP60
UniProtKB ID U5VP60_9PSED
UniRef100 UniRef100_U5VP60
UniRef50 UniRef50_I2BWB7
UniRef90 UniRef90_B0KJ18

Product

Feature Type CDS
Coding Frame 1
Product Name
Amino acid permease-associated region
Synonyms
Evidence for Translation
Charge (pH 7) 6.34
Kyte-Doolittle Hydrophobicity Value 0.959
Molecular Weight (kDa) 47.2
Isoelectric Point (pI) 9.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 425 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000219 (3043 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_23585

Human Homologs

References

No references are associated with this feature.