Pseudomonas sp. VLB120, PVLB_23585
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. VLB120, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGTCGCCCTACCGCCACCTGCTCAAGCCCAAGGCCGGCGGCGTGGCGTTCGTGCTGGCGGCGCTGGGCGAGCAGCTCGATGCACTGCTGGACGTGACCAT CGTCTACCCCGGCAACCAGGCGCCTGGGTTCTGGGCGTTGCTCAATGGCAGCATTAGTCGGGTGATTATCGACATTCGGGTGCGCGAGCTGGACCCGGTA TTGTGGTCGGGGGACTACGAGAACGACCCCGCGTTTCGCCAGACCATACAGGCCTGGGTAAACCAGTTGTGGGTGGAGAAGGACCAGCGGATTGAACAAT TGCGCGCCGAGATGAACTGAATTGATTGCCTGTAAGGGCCTCTGCACGGGTTTACCCGCGAAGAGGCCGGCACAGGGTTAGGCGTAACCCCGATTAAAAA CGAGGCTAATAATTAGAATAAGTAATACTTTTTTGTCATTACCTACCTAAGTGGATAAAAATCGACCAAAGCACAACTACAAAAAGCCTGGATCGAGTCG
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| DNA Sequence for Gene |
>PVLB_23585
ATGGCCAATCAACCTAGCTCCGCCCCCGCCCAACTGCGCCGTGTCCTAGGGCTGCCCGCCCTGGTGTTCTTCGGCCTTGTGTACATGGTCCCGCTGACCA TCTTCACCACCTACGGCATCGTCACTGAACTCACCGGTGGCCGCACTGCCGGCGCCTACCTCGTCACCCTCGTAGCCATGCTGTTTACCGCTGCGTCCTA CAGTTTCATGGTCAAGCGCTTCCCAGTCGCGGGCTCGGCGTACTCGTACACCAACATGGCCTTCGGCCCCAATGCGGGCTTCCTCGCAGGCTGGTCGCTG CTGCTCGACTACCTGTTCCTGCCGATGATCAACTACCTGCTGATTGGCCTGTTCCTCAACATTGCTTTCCCGGCCGTTCCCGCCTGGGCCTTCGTGCTTG GCTCGATCGCACTGGTGACAGTGCTCAATGTGGTCGGCATCAACTCGGTGGCCAAGACCAGCAACCTGATCGTCGGTGCGCAGATCGTCTTCATTGGCGT GTTCATCGGTCTATCCTGCAAGACCTTGGCGGGCCAGCCGCTCGACCTGCTGTCGCCGCTGCTGGGTGACGGCACCAAGCCAGGCTTCGGCCCCCTGATG GCCGGCGCGGCGGTACTGTGCCTGTCGTTCCTCGGCTTCGATGCCGTCTCGACTCTGGCCGAGGAGTGCCGCGACGCCCGCCGCGATGTACCCCGGGCGA TCATCCTCACCACCCTGTTTGCCGGGTTGCTGTTCACTGTGTTGGCCTATGCCAGCCAGCTGGTGTTACCAGGCAGCAGCTTCGCTAACGCCGATGCGGC GGCCAATGAAGTGATGTTCAAGGCCGGGGGCCAGTTCCTGACCAACTTCTTCACTGCCGCCTATGTCGCCGGCAGCCTGGGCTCGGCGCTGGCCTCGCAG GCGGCGGTGTCGCGCATCCTGTTCACCATGGGACGGGACAACGTGCTGCCGCAGCGCACGTTCGGCTACCTGTCGCCACGCTTCGGCACGCCAGTGTTCG CCATTGCCCTGGTGTCTGCGTTCTCGCTGCTGGCGTTGGTGATCGACCTGTCGACCCTCGCTTCGCTGATCAGCTTCGGGGCGCTGGTAGCGTTTTCGGC GGTAAACCTGGCGGTGGTGAAGACGCACCTGATGAACGATGGGGCTCAGCGTCACCTCGTAGGGCTGCTGCGCTATGGCGTGGTGCCGTTGGTGGGGTTG GGGCTGACCTTGTGGCTGTGGACCAGCCTGTCGGCACTGACGCTGGTGATCGGGTTGTGCTGGTTTGCACTGGGGTTAGCCTACCTGGCGGTGCTTACAG CCGGCTTCCGTCGTCCAGTCAGTTTGGTGGATTTCTCCGAAGCGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTTGGCCTGCGGATACTGATAATTCTGCTAGTTGTGCGAGGCCTCGCAAAGGCAAAGACTTACGTAGCACCGTCTATTGCGAGGTATCTGCCATTGAAG ATAGCCGCTTTGGCCTACACCCCATACGGATACATCGACAGTCAAGCTTGGTTTGGCACCCTGCTTGGCTTCAATGGCGAAAAGAGCGATCCGCTGACCG ACAGCTACCCATTGGGACAATGGTTACCGTAGCTACAGTCCAACCCTAATGCGCTTCCATAAGCCCGATAATCTCAGCCCCTTTGGGCAGGGCGGATATA ACGCTTATGCAGACTGTAACTGTAATCCGATCAATTTCCGGGATGACACAGGTCATGCGCGAACATTTGCTCAGCTACGGAAGTTTTGGGCTGAAAATAG CCAGCCGCCCCCACCCTCAACTACCCAGTTGAAACGCGCGCCAAAAAAGAAAGTAACATTTGATAGGAAAATAACTAGCGTCATCTACACGGACGAACAC
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| Amino Acid Sequence |
>Amino acid permease-associated region
MANQPSSAPAQLRRVLGLPALVFFGLVYMVPLTIFTTYGIVTELTGGRTAGAYLVTLVAMLFTAASYSFMVKRFPVAGSAYSYTNMAFGPNAGFLAGWSL LLDYLFLPMINYLLIGLFLNIAFPAVPAWAFVLGSIALVTVLNVVGINSVAKTSNLIVGAQIVFIGVFIGLSCKTLAGQPLDLLSPLLGDGTKPGFGPLM AGAAVLCLSFLGFDAVSTLAEECRDARRDVPRAIILTTLFAGLLFTVLAYASQLVLPGSSFANADAAANEVMFKAGGQFLTNFFTAAYVAGSLGSALASQ AAVSRILFTMGRDNVLPQRTFGYLSPRFGTPVFAIALVSAFSLLALVIDLSTLASLISFGALVAFSAVNLAVVKTHLMNDGAQRHLVGLLRYGVVPLVGL GLTLWLWTSLSALTLVIGLCWFALGLAYLAVLTAGFRRPVSLVDFSEAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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