Pseudomonas sp. VLB120, PVLB_20220

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_20220
Name
Replicon chromosome
Genomic location 4452842 - 4453957 (- strand)

Cross-References

RefSeq YP_008764952.1
GI 557224737
Entrez 17498657
INSDC AGZ36825.1
NCBI Locus Tag PVLB_20220
UniParc UPI0003C09639
UniProtKB Acc U5VM60
UniProtKB ID U5VM60_9PSED
UniRef100 UniRef100_U5VM60
UniRef50 UniRef50_Q4KHT5
UniRef90 UniRef90_I7C3X5

Product

Feature Type CDS
Coding Frame 1
Product Name
permease YjgP/YjgQ family protein
Synonyms
Evidence for Translation
Charge (pH 7) 8.72
Kyte-Doolittle Hydrophobicity Value 0.324
Molecular Weight (kDa) 41.3
Isoelectric Point (pI) 9.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 253 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001837 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_20220

Human Homologs

References

No references are associated with this feature.