Pseudomonas sp. VLB120, PVLB_16270

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_16270
Name
Replicon chromosome
Genomic location 3555764 - 3557077 (- strand)

Cross-References

RefSeq YP_008764164.1
GI 557223949
Entrez 17497859
INSDC AGZ36037.1
NCBI Locus Tag PVLB_16270
UniParc UPI0003C069B2
UniProtKB Acc U5VGU1
UniProtKB ID U5VGU1_9PSED
UniRef100 UniRef100_U5VGU1
UniRef50 UniRef50_Q1CLB1
UniRef90 UniRef90_Q1I7L5

Product

Feature Type CDS
Coding Frame 1
Product Name
branched-chain amino acid transport system II carrier protein
Synonyms
Evidence for Translation
Charge (pH 7) 5.24
Kyte-Doolittle Hydrophobicity Value 1.114
Molecular Weight (kDa) 45.1
Isoelectric Point (pI) 8.55

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 131 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003462 (814 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_16270

Human Homologs

References

No references are associated with this feature.