Pseudomonas sp. VLB120, PVLB_16270
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. VLB120, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGGCAAGGGCACTGCGGACGAGAAGTTCGCCGCCCTGCAGGACGCAGGTGTGAAAACCGTGCGTTCCCTGGCTGACATCGGCAAGGCCCTGGCCGAGCT GACTGGCTGGGAAATGAAGAAGTAATACGCTTTACCCCCCACGCGCACAGAGGCCACCTTCGGGTGGCCTTTGTCGTTATGAGGGGGAGGTCTTTTCTCG GTGCGGAAAATTCGATCGCCTCGATCAGGTTTTTCCACCAGACATTTGCCCGATTCAGCAATAAATTATCGCCTGAGACAGATATCCAGACGACAAACAC ATACGCACATCGGACAAGCAGCACTGTATCAGTGCGTTTGCCCGGTAAAACGGTTAATCTACGCGCTCACTCTGTGCCCGTACCCCAAAAGGGAACGACA CGCTAAACGGGTCTGGCCTACCAAGCCGGGCAGCATTTCCCTCACCCATTGGGAAATCCCCTCTCGAATCCCGATTTCAGCAGTGTGGTACTTCCTTAAA
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| DNA Sequence for Gene |
>PVLB_16270
ATGAAAGTGTTAAAAGGCCAGGATATCCTGGCGCTTGGCTTTATGACGTTTGCGCTTTTCGTAGGCGCCGGCAATATCATCTTCCCGCCCATCGTCGGCC TGCAGTCGGGTCCGCATGTATGGATGGCGGCCCTGGGCTTCCTGGTTACAGCGGTTGGCCTGCCGGTGATCACCGTGGTTGCCCTGGCCAAGGTCGGTGG TGGCATGGACGCGCTGAGCAGCCCGATCGGCAAGTTCTTCGGTGGCTTGCTGGCAGCCGTGTGCTACCTGTCGGTCGGCCCGCTGTTCGCCACCCCGCGC ACCGCGACCGTGTCGTTCGAAGTAGGCGTGGCGCCGCTGACCGGTGAAAGCCCCATGGCGCTGTTCATCTACAGCCTGGTGTACTTCGTGGTGGTACTGG CCGTGTCCATGTACCCTGGCAAGTTGCTCGACACGGTCGGCCGCTTCCTCGCCCCGCTGAAGATCATTGCCCTGGCGGTGCTGGGCATCGCCGCGTTCGC GCTGCCGGCCGGCACCATCGGTGAGGCGCAGCCCGCCTATGCCGCTGCCGCGTTCTCCAAAGGCTTCTCCGATGGCTACCTGACCATGGATACCCTCGGT GCGTTGGTGTTCGGTATCGTGATCGTCAACGCCATTCGCTCGCGTGGTGTCGAGTCGCCTAAGTTGATCACTCGCTATGCCATCATTGCGGGCCTTATCG CCGGTGTCGGCCTGGCGTTGGTCTACGTCAGCCTGTTCCGCCTGGGTGCGGGCAGTCATGAGATCGCGGCGGGCGCCACCAATGGTGCGGCGGTACTGCA CGCCTATGTGCAGCACACCTTCGGCTCGCTGGGCAGCGGTTTCCTGGCCGTGTTGATCGCCTTGGCGTGCCTGGTGACCGCGGTCGGCCTGACCTGTGCG TGTGCCGAGTACTTCAGCCAGATTCTGCCGTTGTCGTACCGTGCATTGGTGGTGATCCTGGCGGGCTTCTCGCTGCTGATCTCCAACCTTGGCCTGACCA AGCTGATCATGTTCTCGATCCCGGTGCTGACCGCGATCTACCCACCGTGCATCGTGGTGGTAGGCCTGAGCTTCGTGAAGGATCTGTGGAATTCGCCGAC TCGCATCCTGGCGCCGGTCATGCTGGTATCGCTGGTGTTCGGTATCGTCGATGCAATCAAAGGCAGCAGCATCGCCCACGTACTGCCGGACTTCATGGCT CACCTGCCGTTCAGCGACGAGGGCATGGCCTGGCTGGTGCCTTCGGTCCTGACCCTGGCAGGCGCCGTGGTCTGCGACCGTATGCTGGGCAAGCCGCGCG AGGCGCTGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGTGTTGAAGCCTGATCGCGGCACCGGCCACAAGCCATAGGGTGTTGCCAGAGGCCCAGACCTGAAGCCCCGTGTCCGAGAGGATGCGGGGCTTTTGTTT GCATCGAGTGGCATCGGCAGAAAAACATTTTGACCCGACGGTGTGCCTTTCCGGGCTTGCAGGCGTCGAAATGCCGTCTCTATTCTTTGTGCACCTGGCG TTCGGGAACTCTGCATGAACTTCATTCAAAGCAACATCTACAACCTGCTGGCCATCGGCTGGTTTGCCCTGTGTTGGGGAGGCTATACCCGTTACGCCAT CTGGAAGGGCCGTGATACGGCGTGCCTGGCCAGTGTCCTGCATTTGTATCGCGAGGACTGGATGCGCCGCATGCTGCTGCGTGACAACCGTATCGCGGAC GCCAGTGTGATCGGCAATCTTGAGCGCAATGCCTCGTTCTTCGCCTCCAGTACGCTGATCATCCTGGCCGGCATCCTTACGGTGCTCGGGGCGTCGGATC
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| Amino Acid Sequence |
>branched-chain amino acid transport system II carrier protein
MKVLKGQDILALGFMTFALFVGAGNIIFPPIVGLQSGPHVWMAALGFLVTAVGLPVITVVALAKVGGGMDALSSPIGKFFGGLLAAVCYLSVGPLFATPR TATVSFEVGVAPLTGESPMALFIYSLVYFVVVLAVSMYPGKLLDTVGRFLAPLKIIALAVLGIAAFALPAGTIGEAQPAYAAAAFSKGFSDGYLTMDTLG ALVFGIVIVNAIRSRGVESPKLITRYAIIAGLIAGVGLALVYVSLFRLGAGSHEIAAGATNGAAVLHAYVQHTFGSLGSGFLAVLIALACLVTAVGLTCA CAEYFSQILPLSYRALVVILAGFSLLISNLGLTKLIMFSIPVLTAIYPPCIVVVGLSFVKDLWNSPTRILAPVMLVSLVFGIVDAIKGSSIAHVLPDFMA HLPFSDEGMAWLVPSVLTLAGAVVCDRMLGKPREALA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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