Pseudomonas sp. VLB120, PVLB_09885

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_09885
Name
Replicon chromosome
Genomic location 2167593 - 2169380 (+ strand)

Cross-References

RefSeq YP_008762900.1
GI 557222685
Entrez 17496589
INSDC AGZ34773.1
NCBI Locus Tag PVLB_09885
UniParc UPI0003C08BF0
UniProtKB Acc U5VCN0
UniProtKB ID U5VCN0_9PSED
UniRef100 UniRef100_U5VCN0
UniRef50 UniRef50_Q9I365
UniRef90 UniRef90_Q1IFT0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -6.65
Kyte-Doolittle Hydrophobicity Value -0.206
Molecular Weight (kDa) 67.7
Isoelectric Point (pI) 6.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 107 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000087 (1217 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_09885

Human Homologs

References

No references are associated with this feature.