Pseudomonas sp. VLB120, PVLB_08330

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_08330
Name
Replicon chromosome
Genomic location 1888641 - 1889717 (- strand)

Cross-References

RefSeq YP_008762593.1
GI 557222378
EC Number 2.5.1.54
Entrez 17496275
INSDC AGZ34466.1
NCBI Locus Tag PVLB_08330
UniParc UPI0003C0B028
UniProtKB Acc U5VFM3
UniProtKB ID U5VFM3_9PSED
UniRef100 UniRef100_U5VFM3
UniRef50 UniRef50_P14843
UniRef90 UniRef90_Q883S5

Product

Feature Type CDS
Coding Frame 1
Product Name
phospho-2-dehydro-3-deoxyheptonate aldolase
Synonyms
Evidence for Translation
Charge (pH 7) -3.98
Kyte-Doolittle Hydrophobicity Value -0.200
Molecular Weight (kDa) 39.0
Isoelectric Point (pI) 6.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 260 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003643 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_08330

Human Homologs

References

No references are associated with this feature.