Pseudomonas sp. VLB120, PVLB_08330

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. VLB120, complete genome. [Details]
DNA Sequence Upstream of Gene
CAGCTCGAGATTGCTGGTTGCCTTGGCTCCCACCAGCAGCCAATCGCACTGCGGCATGTGCGCGACGTCAGCATAGGCCTGAACCTCCATCCGCACCTCA CCGTGTACCGCACTGTCGAGCCTCAACCCCTGCTGACGCACCACGTCGTATTCACTGCGCAACAAGAAGTGCACATCGAAGCCGGCGCGCAGCAGCATCA GCCCATAAAAGCCACCGATGGCGCCACTGCCGATGATGCCGATACGCGGTTTGCGAGAATGCATAGGGGGACTCCAGGTAAAGGACGGTGAGCATTTTTA CACCGGTTTGTCGATGCGAAGCACCTGATTCACCATCAGGCGCCCAGGGCTTTGGGGAAAAACCCCGCAACGACGGGACTCAGCCCATTGTCGCGCCCCC CTTAACGCGCTAAGGTTCGGCTCCCCGCTGCGAATTTTCTTGCTGCTGGGCCGCACGGGGATTGCTGGCGGCCGGCACCCGTGACCTGACGAGTAACACG
DNA Sequence for Gene
>PVLB_08330
ATGGCTGATTTACCGATCGATGACTTAAACGTTGCCTCCAACGAGACCTTGATCACCCCTGATCAGCTCAAGAAGGAAATCCCCCTCAGCGCCAAGGCCC TGCAGACCGTTACTGCCGGCCGCGAAGTGGTGCGCAATATCCTCGACGGCAAGGACCACCGCCTGTTCGTCGTGGTAGGCCCCTGCTCGATCCATGACAT CAAGGCGGCTCATGAATATGCCGAGCGCCTGAAGGTCCTGGCCGAAGAGGTTTCCGACACGCTGTACCTGGTCATGCGCGTGTACTTCGAGAAGCCACGC ACCACCGTCGGCTGGAAAGGCCTGATCAACGACCCGTACCTGGATGACTCGTTCAAGATCCAGGATGGCCTGCACATTGGTCGTCAGTTGCTGCTGGACC TGGCCGAAATGGGCCTGCCGACCGCCACCGAGGCGCTCGACCCGATTTCCCCGCAGTACCTGCAGGATCTGATCAGCTGGTCGGCCATCGGCGCCCGCAC CACTGAGTCCCAGACCCACCGCGAAATGGCCTCGGGCCTCTCTTCGGCAGTGGGCTTCAAGAATGGCACCGATGGCGGCCTGACCGTGGCCATCAACGCC TTGCAGTCGGTCTCCAAGCCTCACCGCTTCCTCGGCATCAACCAGGAAGGTGGCGTATCCATCGTCACCACCAAGGGCAACCCTTACGGCCACGTGGTAC TGCGCGGCGGCAACGGCAAGCCGAACTATGATTCGGTCAGCGTCGCCTTGTGCGAACAGGACCTGGCCAAGGCCAAGATCAAGGCCAACATCATGGTCGA CTGCAGCCATGCCAACTCCAACAAGGACCCGGCCCTGCAGCCTCTGGTGATGGAAAACGTCGCCAACCAGATCCTCGAAGGCAACCAGTCGATCATCGGC CTGATGGTCGAGAGCCACCTGAACTGGGGCTGCCAGTCGATCCCGAAAGACCTGAGCGAATTGCAGTACGGCGTCTCGATCACCGATGCCTGCATCGACT GGAGTGCCACCGAGAAGACCCTGCGCAGCATGCGCGCCAAACTCAAGGATGTGCTGCCGCAGCGCAAACGCGGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCACGCCCAATGAAAACGCCGGGCATCGCCCGGCGTTTTCGTATCTGGCGTCCAGCGCCGGTATCAGACTTTGCTCGAATGGCGCTGCTGGCGTTCCAT GTAGCGCTCGACGTAAGAGCACGATGGGATCACCGTGTAACCCATCTGATCGGCGTACTCCAGGGCCTTCTCGGTCAGCGCTGCGGCAATACCGCGGCCG CGCAAGGCGTTCGGCACGAAGGTGCGATAAATGTCCAGCGTCTGCTTGCCCAGGTCCATGTACGTCAGATAGGCACGGTGACCGTCCACATTGGTCTCGA ACTGATGACCGGCCTGGTCATGGTGGATAGTCAGCGCTTCACTCATCACTACTCCTCACAGGCCTTTATGGCAGGCCCTTACCTTAACCGATGATGGTTT ATCCGGCGGAGGAACCTCTACGCCACCATTTGCCCCTTGGACCTCGAGGCGATTGCAATCGTTCGGTCGGCTGGGCACTCACAAATAGTAGGCGCCGCAG
Amino Acid Sequence
>phospho-2-dehydro-3-deoxyheptonate aldolase
MADLPIDDLNVASNETLITPDQLKKEIPLSAKALQTVTAGREVVRNILDGKDHRLFVVVGPCSIHDIKAAHEYAERLKVLAEEVSDTLYLVMRVYFEKPR TTVGWKGLINDPYLDDSFKIQDGLHIGRQLLLDLAEMGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGGLTVAINA LQSVSKPHRFLGINQEGGVSIVTTKGNPYGHVVLRGGNGKPNYDSVSVALCEQDLAKAKIKANIMVDCSHANSNKDPALQPLVMENVANQILEGNQSIIG LMVESHLNWGCQSIPKDLSELQYGVSITDACIDWSATEKTLRSMRAKLKDVLPQRKRG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site