Pseudomonas sp. VLB120, PVLB_08105

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_08105
Name
Replicon chromosome
Genomic location 1837222 - 1839462 (+ strand)

Cross-References

RefSeq YP_008762548.1
GI 557222333
Entrez 17496225
INSDC AGZ34421.1
NCBI Locus Tag PVLB_08105
UniParc UPI0003C06604
UniProtKB Acc U5VFH8
UniProtKB ID U5VFH8_9PSED
UniRef100 UniRef100_U5VFH8
UniRef50 UniRef50_Q88KP8
UniRef90 UniRef90_Q88KP8

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane receptor FepA
Synonyms
Evidence for Translation
Charge (pH 7) -16.62
Kyte-Doolittle Hydrophobicity Value -0.521
Molecular Weight (kDa) 81.1
Isoelectric Point (pI) 4.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 334 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000897 (3061 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_08105

Human Homologs

References

No references are associated with this feature.