Pseudomonas umsongensis 20MFCvi1.1, D470_RS0103045
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas umsongensis 20MFCvi1.1
GCF_000377725.1|latest |
| Locus Tag |
D470_RS0103045
|
| Name |
|
| Replicon | scaffold00001.1 |
| Genomic location | 684029 - 685309 (+ strand) |
Cross-References
| RefSeq | WP_018925530.1 |
| GI | 517755322 |
| NCBI Locus Tag | D470_RS0103045 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
seryl-tRNA synthetase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -12.17 |
| Kyte-Doolittle Hydrophobicity Value | -0.265 |
| Molecular Weight (kDa) | 47.1 |
| Isoelectric Point (pI) | 4.98 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002939 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: D470_RS0103045
Search term: seryl-tRNA synthetase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
seryl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:10537]
E-value:
9.5e-52
Percent Identity:
35.2
|
References
No references are associated with this feature.