Pseudomonas chlororaphis subsp. aureofaciens 30-84, PCHL3084_RS00030 (clpV2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07724
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07724
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 203 348 2.8E-10
FunFam G3DSA:3.40.50.300:FF:000025 ATP-dependent Clp protease subunit - - 571 787 1.7E-81
Pfam PF10431 C-terminal, D2-small domain, of ClpB protein IPR019489 Clp ATPase, C-terminal 794 861 1.2E-8
PANTHER PTHR11638 ATP-DEPENDENT CLP PROTEASE - - 17 872 0.0
Gene3D G3DSA:1.10.8.60 - - - 792 882 2.0E-7
Coils Coil Coil - - 524 544 -
Pfam PF00004 ATPase family associated with various cellular activities (AAA) IPR003959 ATPase, AAA-type, core 208 339 4.4E-10
Pfam PF17871 AAA lid domain IPR041546 ClpA/ClpB, AAA lid domain 348 440 2.4E-28
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 696 714 2.1E-33
SUPERFAMILY SSF81923 Double Clp-N motif IPR036628 Clp, N-terminal domain superfamily 17 122 1.24E-11
Gene3D G3DSA:1.10.1780.10 - IPR036628 Clp, N-terminal domain superfamily 5 152 3.0E-25
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 571 787 3.5E-66
Pfam PF02861 Clp amino terminal domain, pathogenicity island component IPR004176 Clp, repeat (R) domain 26 73 9.3E-5
NCBIfam TIGR03345 JCVI: type VI secretion system ATPase TssH IPR017729 AAA+ ATPase ClpV1 13 872 0.0
SMART SM01086 ClpB_D2_small_2 IPR019489 Clp ATPase, C-terminal 789 881 2.6E-4
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 667 685 2.1E-33
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 622 640 2.1E-33
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 618 779 7.6E-9
CDD cd19499 RecA-like_ClpB_Hsp104-like - - 586 787 1.21087E-80
Coils Coil Coil - - 473 493 -
Coils Coil Coil - - 417 469 -
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 567 855 1.89E-55
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 165 494 1.21E-71
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 729 743 2.1E-33
CDD cd00009 AAA - - 188 339 1.30483E-15
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 348 565 7.5E-45
FunFam G3DSA:3.40.50.300:FF:000010 Chaperone clpB 1, putative - - 155 347 6.0E-85
Pfam PF07724 AAA domain (Cdc48 subfamily) IPR003959 ATPase, AAA-type, core 618 783 3.8E-42
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 157 347 1.5E-71

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.