Pseudomonas fluorescens SS101, PflSS101_3009 (tssF2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens SS101
GCF_000263675.1|latest |
| Locus Tag |
PflSS101_3009
|
| NCBI Locus Tag | PFLSS101_RS11965 |
| Name |
tssF2
|
| Replicon | chromosome |
| Genomic location | 3446659 - 3448446 (- strand) |
Cross-References
| RefSeq | WP_003191789.1 |
| GI | 489284185 |
| NCBI Locus Tag | PFLSS101_RS11965 |
| NCBI Old Locus Tag | PflSS101_3009 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.90 |
| Kyte-Doolittle Hydrophobicity Value | -0.273 |
| Molecular Weight (kDa) | 67.4 |
| Isoelectric Point (pI) | 6.51 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000087 (1217 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PflSS101_3009
Search term: tssF2
Search term: type VI secretion protein
|
Human Homologs
References
No references are associated with this feature.