Pseudomonas fluorescens Q2-87, PflQ2_1358
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF69304 | Tricorn protease N-terminal domain | - | - | 924 | 1177 | 5.23E-5 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 1224 | 1255 | 1.0E-7 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 806 | 837 | 0.0034 |
| PANTHER | PTHR32305 | - | - | - | 658 | 870 | 5.9E-42 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 806 | 840 | 5.5E-5 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 764 | 799 | 9.0E-8 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 847 | 888 | 2.5E-7 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 376 | 403 | - |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 826 | 863 | 2.0E-6 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 980 | 1012 | 2.2E-6 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 980 | 1011 | 6.2E-4 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 702 | 733 | 2.1E-7 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 1021 | 1047 | 0.0086 |
| Pfam | PF03527 | RHS protein | IPR001826 | RHS protein | 1306 | 1339 | 1.9E-14 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 702 | 731 | 7.9E-6 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 383 | 403 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1485 | 1504 | - |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 764 | 800 | 1.4E-7 |
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 518 | 791 | 4.7E-22 |
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 917 | 1409 | 3.5E-93 |
| SUPERFAMILY | SSF69304 | Tricorn protease N-terminal domain | - | - | 646 | 872 | 3.14E-6 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 1201 | 1240 | 3.8E-6 |
| NCBIfam | TIGR03696 | JCVI: RHS repeat-associated core domain | IPR022385 | Rhs repeat-associated core | 1331 | 1410 | 1.2E-24 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 594 | 635 | 0.0097 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 868 | 905 | 1.7E-4 |
| Pfam | PF20148 | Domain of unknown function (DUF6531) | IPR045351 | Domain of unknown function DUF6531 | 404 | 477 | 8.6E-19 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 1224 | 1256 | 5.8E-9 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 847 | 884 | 5.9E-6 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 1000 | 1031 | 2.3E-5 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.