Pseudomonas synxantha BG33R, PseBG33_5519 (tssK1)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas synxantha BG33R - Assembly GCF_000263715.2
GCF_000263715.2|latest |
| Locus Tag |
PseBG33_5519
|
| NCBI Locus Tag | PSEBG33_RS00575 |
| Name |
tssK1
|
| Replicon | chromosome |
| Genomic location | 6160670 - 6162004 (- strand) |
Cross-References
| RefSeq | WP_005792507.1 |
| GI | 492259375 |
| NCBI Locus Tag | PSEBG33_RS00575 |
| NCBI Old Locus Tag | PseBG33_5519 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -5.34 |
| Kyte-Doolittle Hydrophobicity Value | -0.065 |
| Molecular Weight (kDa) | 48.6 |
| Isoelectric Point (pI) | 6.14 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000078 (854 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PseBG33_5519
Search term: tssK1
Search term: type VI secretion protein
|
Human Homologs
References
No references are associated with this feature.