Pseudomonas synxantha BG33R, PseBG33_4401
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas synxantha BG33R chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAAATACACCGCCACCGTCAGCTACCTGCAACCGTTCACGCTATGGGGCGAGTCGTTCAGTTTTACCAGCTTGGCCACCGGCCAACGCAGTGAAGACGT GCTGTTCAGTCCTCAGCGCATGAGCCTCGGCGGTTCGGCGTCGGTACGCGGCTACAAGGATCAGCAGCTGACCGGCGACAGTGGCGGCTACTGGCGCAAT GACCTGCGCTGGAGCCGCCCGGTGACGCTCGGCTGGCTGCGCCCGGTGTTCGGCGAATACGGCGCCAGCGTGGGCTACGACCAGGGCGTGATCCGCAATG GCCGCTACAACGGCGAAGTGCACGGCCGCGTCTCAAGCAACTCCCTTGAGCTGTTCGCCCGCGGCAAACACGTCAGTACCAGCGTGACCTTTGCCCACTC GCTGGAACGACCGGCCGCGCTGCTTGAGCGTGAAGCACCGATCTACTTCCGCATGGATTTCTTCCTGTAATTCAACGCCCAGTTGCAACGAGAATTTGAA
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| DNA Sequence for Gene |
>PseBG33_4401
ATGGATGTTCGCCAATTTGCCTTCCTGGTTCGCCAGCCATCTGCTGCCCTGAAAAGCCGTGACGCGTTCCTCGGCCTGCCCAAACGTGGCCTGGCGCTGA TCCTGGCCAATGCGCTGTTTTGGCAGCCGCTGCTGGCCCAGGCCGAAGGCATCGTGGTCAGCACGCCCGGCACCACCGTGGGCGCGGCGGGCAATGGCGT GCCGGTGGTGAATATCGCCACCCCAAATGGCGCGGGCCTGTCCCACAACCAGTTCAAGGACTACAACGTCGGCGCCAATGGCGTGATTCTCAACAACGCC ACCGACCGTACCCAATCGACGCAACTGGGCGGCATCATCCTCGGCAACCCGAACCTGCAGGGCCGCGCTGCCAATATCATCCTCAACGAAGTCAACGGTG GCAGCCCGAGCCAATTGCGCGGCTACACCGAAGTGGCGGGCCAGTCGGCAAAGGTCATCGTCGCCAACCCCTACGGCATCACCTGCAGTGGCTGCGGCTT CATCAACACCCCCAACGTTACCCTGACCACTGGCAAACCCATCCTCGATAACGGCCGCCTGGATCGCTATCAGGTCGATGGCGGTGCCGTAACTATCGAC GGCCAGGGCTTGAACGCCAGCAACGTCGACCGCTTCGAAATCATCACCCGCTCGGCCAAGATCAATGCGCAGATCAATGCGCGCAACTTGAGCGTGGTTG CCGGGCGCAATGATGTTAATGCGCAGACCTTGAGTGCAACCGCACGGGCCGATGACGGCAGCGCCAAGCCGGAGCTGGCGATTGACTCGACGGCGTTGGG TGGGATGTATGCCGGGGCGATCAAGCTGGTGGGGACTGAAGCCGGTGTGGGCGTGAAGCTCGACGGTGCGTTGATGGCCAGTGGGGGGGATATTCAGCTC GATGCCAATGGACGCTTGAGCATGGCCAATGCCAAAGCCAGCGAAGCGGTGGTGGTCAAGGCCGGTCAATTAGACGCTGCTGGGGCTGTGTATGCCGGCA CGCGAATCGATCTGCAAACCACAGCGGGCCTGAACAACCAGAAAAGCCTGGCGGCCCGCGACAGTATCACCATTACCAGCGGTGGCACGGTGGTCAACAG CGGCATCATCGAAGCCGGTGTCAACGCCGATGAAAGCCGTAATGCCAGTGGCGATGTCAGCCTGCACGCGGCGAACCTGAGCAATAGCGGCAGCGTGGTT GCCAGCCGAACCCTCACCGCGACAGCCAACCAAACCTTGAACAATCAAGGTGGCACATTGAGCGGTATAGGCGCCGTGGTTAACGCCGGCCAACTCGACA ACCGTGGCGGTCGTGTATTGGGGAAGGACTCGCTCAAGGTCACGGCCACCGGCCTGGATAACCGCACCAACGGTCTGCTGCACAGTGAAAACAGCACCGA CGTTACGGTAACCGCTGCACTGGATAACCAGAGCGGTCGCGTGATCGGCCTCAAGAACCTGGCGCTCAACGCCGGCCAACTGACTAACGATAACGGCCTG GTCGCCAGCCAGGCGCAGGCCCGTGTAACCGCCGGGCAATTGAGCAACCAGGCGGGTGAAGTCTCTGCCGATCAGACTACCGTGATCGCCACGACCCTGG ACAACCGTTCGGGCAAATTGCTGGGCAGCAACCTCAACGTGACCGCCAGCGGTGCCATCGATAACCGTCTGGGGATTTTCTCCGCCACCAGCCTGACGGT ACAGTCTGCCAGCCTGGATAACCGCGACAAAGGTTCCGTTGCCAGCCAGGGCGTGATGAACCTGACGGTCGCCGGGCTGCTGGACAATCGTAATGAAGGC AACCTCGTCAGCCAGGGGGCTCAACAAATAGCCGCAGGGCAGTTGAACAACAGCCGGGGCGGCCTGGTGTCCAGCAAAACTACCCTGGCGCTGCACGGCG ACAGCCTGATCAACCAGGGTGGCCTGGTCATTGCCGACGGCGCGCTGACCCTCACCGGCGGCGATCTGGATAACAGCCTGGCCGGCGTGATCAGCACCAA GGCCGCAGCGCACGTGCAACTGAATCAGTTGAACAACAGCAACGGCGGCAAGTTGGGCAGCGATGGTGCGCTGACCCTCAACGCCAACCAGCTCGAAAAC GGCGCCGGTCGCATCAGCGCCAAGGGCGACTTGCAGGCAACGGTCGGTGTGCTCAATCAACAAGCGGGCGAACTCGTCAGCGACGGTGCGCTGAACCTGA CCGGCACGTCCCTGGATAACCGCAACGGCGGCCTTATCGCTGCCACCCACGGCGTGGACCTGCGCAGCCAGACCATCCTTAACCAGCAAGGCGAGATATC CAGCCAGGCAAAGGTGCTGGTGATCGCTGATCAACTGAACAACACCACCGGCAAGGTCATCGGCGACAGCGGCCTGACGCTCACGGTCCAACGCCTGCTC AACCAGAGCAAAGGCTTGCTGGCGGGGCGTGAGAGCCTTGTGTTGAACGGCGCGCAACTGGACAACAGCCAGGGTGGCCGTGTCACCAGCCAAAAAGACC TGGACATCACCCTGACCGGCGACCTGCTTAACCAAGGGCAGGGCACGCTACTCAGCGAGGGCGCGTTAACCGTCCAGGCCGGTACGCTGGACAACAGCCT GGGCGGCATTTTGTCCGCAGCCAATGCGTTGTCGATCACCACTCAGGGCCAGTTGAACAACCAGGCAGGCAAACTACTCGCCGATGGCACAGCCACGCTG GTCAGCGCTGCGCTCAACAACAGCCAGGGCGGTGTGATCAGCGCCAAGCAGCAGGTTGATGTACGCAGTGCCGGCCTGAATAACAGCCAGCGCGGCAGTA TCAGCAGTGACGCTGGTATTACCCTCAACGCAGGGCAACTGGACAACAGCCAGCAAGGGTCGATCTTCGCCAAGTCAACGGTCAAGGCAACCCTGAGTGG GCTGGATCAGCATGACCGTGGTGAGCTGGTCAGCAACACCAACATCGAACTGGACTTGAACCATGGGCAACTGATCAACCGCGACCACGGCCTGATCGCG ACACCGGGCCAACTGCTGCTGAACAACCTGGGCAACGTCGACAACAGTCAGGGCGGTGAAATCTCCAGCAGCCAGTCATTCCTGTTGATGGCCGATGCGC TGAATAACCGCGGCGGCAAAGTCATCAGTGGCGACAGCCTGCAGGTACGTATCGCCAAGGCGCTGGATAACAGCGTGGAAGGTGTACTGTCCGCCAAGAG CGTTCTGCAAGTGGCAGCCGACAGCCTGGACAACCAGGCCCGTGGCGCGCTCGCCAGCCGTGGTGCGCTGGACCTGAAGGTCACCGGCGCGCTGGATAAC CATAACCAGGGGCAGATATCCGCCGCTACGGTTTTGACTACCACCTCAGGCTCCTTGAACAACAGCGACAAGGGCAGCCTCTCGGCCGGCACGCTACAGA CGCTCAACACCGGCGCGCTGGACAATCACCAGGGCGGTCGCATCGTCAGCGACGGTAGCCAGACCGTCACTGCCGCCAATGTGGATAACCGCGCGGGTGT GATCGGCAGTCAACAGGCGCTGAACCTGATCACTGCCAACCTCGATAACACTGCCGGGTTGATCAACAGCCAGGCGGACCTGACCCTGACCGGGCAAACA GTCGACTCAAGCCTGGATGGCGAAATCTCAGCCAAGGGCGACTTGAAGCTCATCGTCCAACAGCTGATCCAGCGTCAGGGCCGCTTGATCGGCGAACGCG CCGTAACCCTCGACCTGCAAGGCGGCAATCTCGATAACAGCGCAGGCTTGATCAGTGCCAAAGGCCCGTTGACCTTCGCGCGCCTGGCCAACCTGACCAA CCGCGAACAAGGCGAAATCTCCAGTCAGACGGCGTTCACCGTAGCTGCCAAACGCATCGATAACGGTGATCGTGGGGTCATCCTCAGCGCTGATCAATTG CGTCTTGAAGCGGATACAGTGTTCAACGCCAACAAGGGCTTGATCTCCGGATGGAACGGTCTGACGGTGGTCGGCAATAGCCTCGACAACAGCGCCGAGG GCACGTTGTCGAGCAAGAGTGGCACGTTGCACACCGACCTCACCGGTGTATTGGATAACCACGCGGCGGGTGCCCTGGTCAGCCTGGGCAAACAAACGCT CATCGCGGGCAGCCTGAACAATGATCAGGGGATCATCTCCGGCCAGGCCGATGTTGGCCTCACCGTTGCCGGTCGCCTGGACAACGGCAACAACGGCTTG ATTTCCGCCGGTCAACAGCTGGACTTCAACAACGCCCAGAGTGAAATCCTCAACCGTGGCGGCCAGATCAGCGCGGCCAATATCTCCATGATCGGTCAAA GCCTGGACAACAGCGGCGGGCAACTGATCAGCCAGGGCACCCTGGAAGGCACCCTCAGTGGTGCGTTGATCAACGCCAACAACGCCCGCCTGGCCAGTGG CGCAGCACTGTTGCTGAACGCTGCCAGCCTGGACAACCGAGGCGGCCAACTGGTCAGCCAGGATCGACTCGACCTGACCCTTGCCAACGGCGACCTGGAT AACAGCGGCAAAGGCACGCTCGCCAGCCAGAAAGACCTGCTGATCAAGCTGTTGGCCGGTGACATCCACAACCAGCAAGACGGCTTGATTTACAGCCAAA AGGGCAAGCTGGATCTTGCCGCTCAAGCGCTCAACAACCAAAAGGGCACGCTGCAAAGCCAGACCGAAAACCGCTTGCGCCTCAGTGGCGCCCTGAACAA CCAGGGCGGTCGGGTCGACAGCCTCAGTGGCAACCTGGACCTGGAAGCGGCCAGCGTAACCAATACCGCAGGCGGCATCCTCAACAGCAGCACGGGTTGG ATCAAACTGGTCACCGGCCTGTTCAATAACGGCAGCGGCATCACCCAGGCGCAATCGGTGGATATCACAGCCAGGGACGGGTTGCTCAACCAGCTTGGTC ATCTGTCGGCGCTGGGCGGTGAAAACCGCATCGTCACCAGCACCTTGAATAACCAGGGCGGCGGTGTGTATGCCGACACCTTGCTCAAAGTCACGGCCGC GAACTTCGATAACCAGGGCACTGAGGTCGGTAATGGTGGCAAGGTCGGCGCCCGCGCAATTGATTTCGGCCTGACGGGCACGCTGAGCAACAGCTATGGC CTGATTGAAAGCGACGACACCCTGCGCCTCGCCGCGCAAACCATCAACAACGTCAGCGGCAACCTGCGCGCCATGGGCCGGGTTGGCACCACCGATATTC GTACCACGGGCCTGTTCGATAACCGCTTCGGCGCGCTGGAAAGCGCCAACGAAACCCTCAACCTGCAAGCGGCCAGCCTGGATAACAACGGTGGGCGCAT CGTGCATACCGGCACTGGCACGTTTGACCTGACGTCCGACCAAGTCACCCGTGCCGGTGGCAGCTTCGTCACCAACGGCCAACTGGATATCAAGGCAGCA AGCTGGACCAACAGCAGTGTGATCCAGGCCGGGCGCCTGAACTTAGACATTGGCCAATTCACCCAGACCGCCAGCGGCCAATTGCTCGGCGCACAAAGCC TCACCGGCACCGGCGACACCTGGACCAACGACGGCCTGCTGGCCAGTAACGGCAACCTCAAGCTAACCCTGACCGGCGGCTACAGCGGTAACGGCCGGGT CAGCAGCCTGGGCGACATGACCCTCGCCGCCGCCAACATGGACCTGGGTGAAAATGCTCGTATTGGTGGTGGTGCAATCACCCAGGTCACGAGCACCAAC GTCCTGACCAATCGTGGTCGCGTGACCTCGGTAGGCGACCTGACGGTCAACGCTGGCGCCCTGAACAACTACGGCACCCTGGGCGGCTCCGAGAATGTCC GCCTTAACGCCACGCATCTGCTCAATGAAAAAGGCCTGTTGTTCAGCGGCAAGGACATGACCTTGCGCGTCAACGACTTCAGCAACCGTTTTGGTGATGT CTACAGCCTGGGTGGCCTCGACATCGCACGCGATGATGCCAATGGGCGCAGTGCACTGATTGAAAACGTCTCCGGTACCTTGGAAAGCGACGGCAACATG CGCTTGCTGGCGGATACCCTGAGCAACCGCCGCGACCAGTTCACCACGGAGAAAAGCCTGGTTTCCGGGAGCATCGGTGTTTACGGCAACGATTACTGCA AAGGTAAAGGCTGCGAACTGAGTTTCAGCGGCGTCGAAACCTATGAGGACGTCATCAAAGGCAGCTCCGCCTCCGCGTTCATCAATGCCGGTGGTGATCT CACGGTAGGCAGCCAGACGTTCGATAACCTCTATAGCTCGGTATCGGCCGCTAAAAACATCCTGATCAACACCGACGTGCTGAACAACACCGGCGCTGCC GGCGGTGAGCAGCGTAATTTCGGTTACGCCTACTACACGCGTAACCGTTCGGCTTACTCATTGCTGATGAGCGAAGTCGAACAGTTCAACCGTAGCAACG ATCCCAGCTCAAGTGACTATAAGCCGGGTCAGTACACGTTCGACCAGTTCATTGAGAAGACGAGGTTCTCGGATACCTACTTCACATCACCTATCGACTA CACCGTGCCCACCTCTGGCAGCGTGATCGCCCAAGCGGTGATCCAGGCAGCCGGATCGGTCACCGTTAACGCAACCAAAGAAATCAACAACAGCGTCATC CGCCCGAACGCTACCAACATCGACACCCCGGCGGCCAACCGCAACACCAACTCGGATGTATTTGCCTCCACCGTCAAGCCGGCGATCACCGCGCAACTGC CGCCAGACTTGGCCCAACGCCAAGTCAACCCGGTGACCTTACCCGGCTTCAGTTTGCCGACCAGCCAGAACGGCTTGTTCCGCCTCAGCGGCCAGGCAGC GAAAGGCGGCGCAGCGAGTAAAGCGGACACCGCCACGGGTGACTTCAGCGTCAACGGGCGAGTCATCACCGCCGCCGACCGCGAAAAAACCCTCGACTAC ACCGCCGTGCAAGAACGCGGTTTCAACCTCGACGGCCAGCCCGTCAGCGGTGCAGTCAACGGCCAGGGCCCGCTGGCTCTGGACAATCGCTCCCCCTCGA TCACCCGCGTGCAAGGCCTGCCGGACATTACTCCGGTAGATAACAGCCACAAATACCTGATCGAAACCAACCCGGCGCTCACCGACCTCAAGCAGTTCAT GAGCTCCGACTACCTGCTGGGCAAACTCGGCTACAACCCCGACGCCAGCTGGAAGCGCCTGGGCGACGGTCTGTACGAGCAGCGCCTGATCCGCGAAGCC GTGGTGGCCCGCACTGGCCAACGCTACATCAACGGCCTCGCCAGCGATGACCAACTGTTCCGCTACCTGATGGACAACGCCATCTCGTACAAGGATTCGC TCAACCTGCAGCTCGGCGTATCGCTGACCGCTGAACAAGTCGCGGCGCTGACCCACGACATCGTGTGGATGGAAGAAGCCGAGGTCAACGGCCAGAAAGT CCTGACCCCGGTGCTCTACCTGGCCCAGGCCAACAACCGCCTGGCCCCCAACGGCGCGCTGATCCAGGGCCAGGACGTGAGCCTGATCACCGGCGGCGAC CTGCACAACAGCGGCACCCTGCGTGCCACCAACAACCTGAACATGGTCGCCGGCAACATCGACAACAGCGGCCTGATGCAAGCCGGCAACCGCCTGGAAA TGCTCGCCACCGACTCGATCCGCAACAGCCGTGGCGGCATCATCAATGGCCGCGACATCAGCGCCACCGCGGTGACCGGCGACATCATCAACGAACGCAC CGTCACCACCTTCAAACAGGAAGGCCAGGGCTACCAACTGCGCAACGACGTGGCCAGCGAAGCCTCCCGCTTTGAAGCCACCGACACGCTCAAGCTGAAC GCGGGCCGGGACGTGCTCAACCTCGGCAGCAACCTCAAGGCCGGTGGCAACGCCAGCGTGACCGCAGGGCGTGACGTGGTGATCGCCAGCCAGACCGAAC AGGACGACTACGCCTACCAACGCCGCCGCATCAGCGGCACCGAGCAAACCACAATGCAACATGCGTCGACGGTGGAGGTTGGCGGCCACATGGCCATTGA GGCCCGGCGCGATATTGCGGTTATTGCCAGCACCGTTAGTGCTGCCAAGAACCTGAGCGTTGAAGCGGGTGAAAACGTGTCGCTTATTTCTGCGGCCAAT GAGCAACACGAGTATTCGAAAGGCAAAAAAGGCAATACTAAAACCACGACCCAACTGGACAACGTGACCCAGCAAACCGCTCAGCTAAACGCTGGCGGTA ACTTGGTGGCTATTGCAGGTACCGACCTGACCCTGGTTGCCAGCAAAATCAGCGCCGGCAACGAAGCCTATATTCAGGCGGGTGAGGAGCTGAAGCTGTT GGCCGCGCAAGACAGTCATTACTCGTTGTATGACATGAATAAAAAGGGCAGTTGGGGTAGCAAGAAAACTCAGCGTGATGAGGTGACCCAGGTCACCCAT GTGGGCAGCGAGATCAAAGCCGGTTCGAGCATGATGCTCGAAAGTGGCAGTAATCAGCTGTTTCAAGCGGCAAAGCTCCAGAGTGGGGGGGACATTGCGA TTGTCAGCGGTGGCTCGGTGACATTTGAGGCGGTTAAAGACTCGCGGCAGGAAAGTCACGAAAAGAGTAAGAGCGATATGGCGTGGAACAGTGCCAAAGG TGAAGGCAGTACTGACGAGACATTACGTCAGACCTTGATGGTGGGGCAGGGGCAACTCGCTATTCGCGCCGCCGGTAAGATCAATATAGACCTCAAGCAG ATTGACCAAAAAACTGTCAGCCAGACGATTGATGCAATGGTTCAAGCCGAGCCTCAGCTTGCCTGGATCAAAGTAGCTGAAGCCAATGGGCAAGTTGATT GGCGAATGGTCAAGGAGATCCACGACAGCTGGGACTATAAGCAATCGGGATTAGGTGCCGCACCCGCGCTGATTATTTCGATTGTCGCCAGCATCTACCT GGGGCCCCTCGCGGGGGCTATGGCTAGCAACTTTGCGGTTGGGACAATCAATGGCGGCGGTGATATTGGTGCGGGACTGAAAGCGGCCACCAGTAAAGAT GCGATCAAGGGTTACGCGACGCAAGTGGTCACTAGCGGAGTCCTGGCCGGAATAGACACCGCTGTCGGTGGTTGGAATACCGACGGGGCGTTGATTCTTA ACGCGGACGGGGTCAATAACCCTGGTTATAGCAAGAGCATGCTGGACTGGAACACGGTCAGTGACAATGTGCTGCGCAGCACTACCCACGCTTTGGTAGC CGGCAGCATCAATACGGCGATTAACGGCGGTAGCTTGAAGGACAATCTTGGCGCAGCCGCAGTTTCCGAAGGGCTGGACCTGACGGCAGCCTTTGGCAAC AAGCAGGTGGGCGATTTGGCTGAGTACCTGAAAATAACCCCAGGGTCGGCACAAAAAGTCTTGATGCATGCTGTATTGGGAGGAGCGTTATCAAGCGCTA AAGGTGGAGACTTCAAGACCGGGGCTTTAGCCGGCGCCGCCTCAGAAGGATTGACAGCTTTGGCAACGGAAAAACTGGGTAACTACCTGGACTCCCGGTT TGCCACGGATACCCAGTTCCGGGTAGGCACCGCTCAACTCGTCGGCGTTTTGGCGGGTGCTCTAGTCAACGGTGATCCTGCAACCGCTAGCTGGGTAGCC GGAAACGCAAAAAAATATAATGATGAGTTTCATATTGGTGGGCCCGCCATTGCGGGGGCTGTGAGTGCAGGTGAAAAAGTGCTTAAAGAGGGTGGAACGC CAGACCAGGCTACCGCTGCAATGAGTTCGCACCTGCGGGGCGATGGTTTTGATGGGCCAATGCCTGCCAATGGACTTGTACAAGCATGGTCAATCGGTGT TGGTCTGCCCCTGGCGGCAGTTGAAGCACCTGCTGTAGGGATAGGAGGGCTGGTAGCGGGTGCCTTGATTTCCGGCGGTGCAAATTTCGGCTATCAGCTA TCGACGGGTAAGGACGTTAACTACACCGATGTATCCATCGCCGCGACGGTTGGAGGATTAACGCAAGGGAAGGGGTTCTGGCTGACTCAAGGATACGGAT TGAGCGGCGCTTATTTGGGCAGTGTAATCAAGGGCGAGGATGCGAAGTATTCGTTGCTGGGCTCTGTGCTAGGTACTGCAATAGGTTATAAATCCGGAAA TGTGATCACAGGGCAGTTGAAACCATTAATAGGAAATACTGCGAGCGAAACCTCAGGAGCTGCGACAGGTTCTGTATTGTCTGAAATTGTCAGCGGTGGT GTATCTAATATGGGAAGTAATAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCCAAAAACGGTAGGTTGGTACCTATTGGGTACGCTAGTTGTGTATTTTTTTCTGGTTTTTTTTATGGTGGGTATTGTCGGTAATTTACTTGTGGCGAC GATTGCATATTTCAAGCTGGGTCATTGGGCGCTTGAGGCTGGCGTTATCAATGCCTCTCTGAAAGTCGCTGCTTACTGCGGGGTTCCAGTAGGTGCGGGT ATTTGGGTGTTGTCATGGCTGAAAAGTCGTAAAGACAAAAAAAGGCACTAGTATTTGTGCTATCGGTGGGGAAATGGGATGAAAGGAAAAGGGGACGGAT TTATGTGCGCCAGACAAAGCGTGGTCGCCTGGAATTGACGGCGCAAGCTGTCATGAAATGGCGTAAGAAACCGAGCGGGTACTAACCCCGTCCGGCAAGG ACCAGCCATCTACCGGAAGCGAGTCTTGTGTGGCGCTCGGGTAACCGGCACTGCGAAGCTTAGACAGCGAGTGTATAGGCCGTGTAATACAGCCTCGAAA
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| Amino Acid Sequence |
>hemagglutinin
MDVRQFAFLVRQPSAALKSRDAFLGLPKRGLALILANALFWQPLLAQAEGIVVSTPGTTVGAAGNGVPVVNIATPNGAGLSHNQFKDYNVGANGVILNNA TDRTQSTQLGGIILGNPNLQGRAANIILNEVNGGSPSQLRGYTEVAGQSAKVIVANPYGITCSGCGFINTPNVTLTTGKPILDNGRLDRYQVDGGAVTID GQGLNASNVDRFEIITRSAKINAQINARNLSVVAGRNDVNAQTLSATARADDGSAKPELAIDSTALGGMYAGAIKLVGTEAGVGVKLDGALMASGGDIQL DANGRLSMANAKASEAVVVKAGQLDAAGAVYAGTRIDLQTTAGLNNQKSLAARDSITITSGGTVVNSGIIEAGVNADESRNASGDVSLHAANLSNSGSVV ASRTLTATANQTLNNQGGTLSGIGAVVNAGQLDNRGGRVLGKDSLKVTATGLDNRTNGLLHSENSTDVTVTAALDNQSGRVIGLKNLALNAGQLTNDNGL VASQAQARVTAGQLSNQAGEVSADQTTVIATTLDNRSGKLLGSNLNVTASGAIDNRLGIFSATSLTVQSASLDNRDKGSVASQGVMNLTVAGLLDNRNEG NLVSQGAQQIAAGQLNNSRGGLVSSKTTLALHGDSLINQGGLVIADGALTLTGGDLDNSLAGVISTKAAAHVQLNQLNNSNGGKLGSDGALTLNANQLEN GAGRISAKGDLQATVGVLNQQAGELVSDGALNLTGTSLDNRNGGLIAATHGVDLRSQTILNQQGEISSQAKVLVIADQLNNTTGKVIGDSGLTLTVQRLL NQSKGLLAGRESLVLNGAQLDNSQGGRVTSQKDLDITLTGDLLNQGQGTLLSEGALTVQAGTLDNSLGGILSAANALSITTQGQLNNQAGKLLADGTATL VSAALNNSQGGVISAKQQVDVRSAGLNNSQRGSISSDAGITLNAGQLDNSQQGSIFAKSTVKATLSGLDQHDRGELVSNTNIELDLNHGQLINRDHGLIA TPGQLLLNNLGNVDNSQGGEISSSQSFLLMADALNNRGGKVISGDSLQVRIAKALDNSVEGVLSAKSVLQVAADSLDNQARGALASRGALDLKVTGALDN HNQGQISAATVLTTTSGSLNNSDKGSLSAGTLQTLNTGALDNHQGGRIVSDGSQTVTAANVDNRAGVIGSQQALNLITANLDNTAGLINSQADLTLTGQT VDSSLDGEISAKGDLKLIVQQLIQRQGRLIGERAVTLDLQGGNLDNSAGLISAKGPLTFARLANLTNREQGEISSQTAFTVAAKRIDNGDRGVILSADQL RLEADTVFNANKGLISGWNGLTVVGNSLDNSAEGTLSSKSGTLHTDLTGVLDNHAAGALVSLGKQTLIAGSLNNDQGIISGQADVGLTVAGRLDNGNNGL ISAGQQLDFNNAQSEILNRGGQISAANISMIGQSLDNSGGQLISQGTLEGTLSGALINANNARLASGAALLLNAASLDNRGGQLVSQDRLDLTLANGDLD NSGKGTLASQKDLLIKLLAGDIHNQQDGLIYSQKGKLDLAAQALNNQKGTLQSQTENRLRLSGALNNQGGRVDSLSGNLDLEAASVTNTAGGILNSSTGW IKLVTGLFNNGSGITQAQSVDITARDGLLNQLGHLSALGGENRIVTSTLNNQGGGVYADTLLKVTAANFDNQGTEVGNGGKVGARAIDFGLTGTLSNSYG LIESDDTLRLAAQTINNVSGNLRAMGRVGTTDIRTTGLFDNRFGALESANETLNLQAASLDNNGGRIVHTGTGTFDLTSDQVTRAGGSFVTNGQLDIKAA SWTNSSVIQAGRLNLDIGQFTQTASGQLLGAQSLTGTGDTWTNDGLLASNGNLKLTLTGGYSGNGRVSSLGDMTLAAANMDLGENARIGGGAITQVTSTN VLTNRGRVTSVGDLTVNAGALNNYGTLGGSENVRLNATHLLNEKGLLFSGKDMTLRVNDFSNRFGDVYSLGGLDIARDDANGRSALIENVSGTLESDGNM RLLADTLSNRRDQFTTEKSLVSGSIGVYGNDYCKGKGCELSFSGVETYEDVIKGSSASAFINAGGDLTVGSQTFDNLYSSVSAAKNILINTDVLNNTGAA GGEQRNFGYAYYTRNRSAYSLLMSEVEQFNRSNDPSSSDYKPGQYTFDQFIEKTRFSDTYFTSPIDYTVPTSGSVIAQAVIQAAGSVTVNATKEINNSVI RPNATNIDTPAANRNTNSDVFASTVKPAITAQLPPDLAQRQVNPVTLPGFSLPTSQNGLFRLSGQAAKGGAASKADTATGDFSVNGRVITAADREKTLDY TAVQERGFNLDGQPVSGAVNGQGPLALDNRSPSITRVQGLPDITPVDNSHKYLIETNPALTDLKQFMSSDYLLGKLGYNPDASWKRLGDGLYEQRLIREA VVARTGQRYINGLASDDQLFRYLMDNAISYKDSLNLQLGVSLTAEQVAALTHDIVWMEEAEVNGQKVLTPVLYLAQANNRLAPNGALIQGQDVSLITGGD LHNSGTLRATNNLNMVAGNIDNSGLMQAGNRLEMLATDSIRNSRGGIINGRDISATAVTGDIINERTVTTFKQEGQGYQLRNDVASEASRFEATDTLKLN AGRDVLNLGSNLKAGGNASVTAGRDVVIASQTEQDDYAYQRRRISGTEQTTMQHASTVEVGGHMAIEARRDIAVIASTVSAAKNLSVEAGENVSLISAAN EQHEYSKGKKGNTKTTTQLDNVTQQTAQLNAGGNLVAIAGTDLTLVASKISAGNEAYIQAGEELKLLAAQDSHYSLYDMNKKGSWGSKKTQRDEVTQVTH VGSEIKAGSSMMLESGSNQLFQAAKLQSGGDIAIVSGGSVTFEAVKDSRQESHEKSKSDMAWNSAKGEGSTDETLRQTLMVGQGQLAIRAAGKINIDLKQ IDQKTVSQTIDAMVQAEPQLAWIKVAEANGQVDWRMVKEIHDSWDYKQSGLGAAPALIISIVASIYLGPLAGAMASNFAVGTINGGGDIGAGLKAATSKD AIKGYATQVVTSGVLAGIDTAVGGWNTDGALILNADGVNNPGYSKSMLDWNTVSDNVLRSTTHALVAGSINTAINGGSLKDNLGAAAVSEGLDLTAAFGN KQVGDLAEYLKITPGSAQKVLMHAVLGGALSSAKGGDFKTGALAGAASEGLTALATEKLGNYLDSRFATDTQFRVGTAQLVGVLAGALVNGDPATASWVA GNAKKYNDEFHIGGPAIAGAVSAGEKVLKEGGTPDQATAAMSSHLRGDGFDGPMPANGLVQAWSIGVGLPLAAVEAPAVGIGGLVAGALISGGANFGYQL STGKDVNYTDVSIAATVGGLTQGKGFWLTQGYGLSGAYLGSVIKGEDAKYSLLGSVLGTAIGYKSGNVITGQLKPLIGNTASETSGAATGSVLSEIVSGG VSNMGSNK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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