Pseudomonas synxantha BG33R, PseBG33_4401
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF51126 | Pectin lyase-like | IPR011050 | Pectin lyase fold/virulence factor | 56 | 368 | 2.42E-61 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 805 | 846 | 0.035 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 764 | 802 | 0.0065 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 871 | 909 | 0.038 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1069 | 1143 | 0.49 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 578 | 618 | 0.006 |
| Gene3D | G3DSA:2.160.20.10 | - | IPR012334 | Pectin lyase fold | 51 | 336 | 1.2E-102 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 886 | 950 | 19.0 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1146 | 1176 | 6.7E-5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 784 | 824 | 1.5E-4 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1575 | 1631 | 14.0 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 723 | 763 | 1.7E-5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1464 | 1503 | 0.0024 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1428 | 1492 | 0.83 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1771 | 1805 | 0.79 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1296 | 1349 | 0.43 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 779 | 846 | 2.5E-5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 383 | 417 | 0.57 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 826 | 866 | 6.4E-4 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1235 | 1268 | 0.015 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 974 | 1017 | 7.1 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 382 | 455 | 7.7E-4 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 653 | 735 | 0.0021 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1061 | 1100 | 0.002 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 397 | 426 | 0.44 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1008 | 1066 | 1.3 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1909 | 1963 | 4.7E-5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1271 | 1310 | 0.0049 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1399 | 1426 | 0.038 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1482 | 1516 | 6.8 |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 2713 | 2856 | 1.9E-8 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 683 | 719 | 0.002 |
| SMART | SM00912 | Haemagg_act_2a | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 64 | 185 | 1.2E-48 |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 2506 | 2638 | 0.002 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1925 | 1963 | 0.024 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 2059 | 2098 | 38.0 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 458 | 496 | 0.0072 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1748 | 1772 | 1.2 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 479 | 518 | 0.0015 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 519 | 556 | 0.029 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 621 | 659 | 2.0E-7 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1516 | 1569 | 67.0 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 424 | 455 | 0.0073 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1292 | 1332 | 0.14 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1125 | 1165 | 0.011 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1528 | 1569 | 0.0096 |
| NCBIfam | TIGR01901 | JCVI: filamentous hemagglutinin family N-terminal domain | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 82 | 180 | 6.0E-19 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1432 | 1448 | 0.48 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1710 | 1796 | 10.0 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1207 | 1238 | 0.3 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 487 | 556 | 0.75 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 890 | 930 | 0.0055 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1357 | 1396 | 2.7E-4 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 744 | 782 | 0.003 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 321 | 368 | 1.7 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1166 | 1202 | 5.7E-5 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1149 | 1217 | 2.7E-6 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1976 | 2016 | 110.0 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 543 | 575 | 0.46 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 2848 | 2872 | - |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1082 | 1122 | 0.0021 |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 2639 | 2709 | 1.3E-6 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1683 | 1717 | 0.088 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 2172 | 2209 | 58.0 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1019 | 1058 | 2.6E-5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 932 | 951 | 0.39 |
| Pfam | PF05860 | TPS secretion domain | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 56 | 307 | 1.7E-59 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1729 | 1764 | 2.7 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 328 | 368 | 0.019 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 848 | 889 | 4.5E-5 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.