Pseudomonas synxantha BG33R, PseBG33_3875 (pfiT/atuR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas synxantha BG33R - Assembly GCF_000263715.2
GCF_000263715.2|latest
Locus Tag
PseBG33_3875
NCBI Locus TagPSEBG33_RS08435
Name
pfiT/atuR
Replicon chromosome
Genomic location 4384511 - 4385134 (- strand)

Cross-References

RefSeq WP_005789994.1
GI 492250471
NCBI Locus Tag PSEBG33_RS08435
NCBI Old Locus Tag PseBG33_3875

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.83
Kyte-Doolittle Hydrophobicity Value -0.020
Molecular Weight (kDa) 23.1
Isoelectric Point (pI) 6.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4MO7 TRANSCRIPTION 09/11/13 Crystal structure of superantigen PfiT Pseudomonas fluorescens A506 1.701 X-RAY DIFFRACTION 95.2
4MXM DNA BINDING PROTEIN 09/26/13 Crystal structure of superantigen pfit Pseudomonas fluorescens 1.95 X-RAY DIFFRACTION 94.5

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000241 (6008 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PseBG33_3875
Search term: pfiT/atuR

Human Homologs

References

No references are associated with this feature.