Pseudomonas synxantha BG33R, PseBG33_3128 (tssL2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1 | 16 | - |
| NCBIfam | TIGR03349 | JCVI: DotU/TssL family secretion system protein | IPR017732 | Type IV / VI secretion system, DotU | 59 | 266 | 1.9E-60 |
| Pfam | PF09850 | Type VI secretion system protein DotU | IPR017732 | Type IV / VI secretion system, DotU | 60 | 261 | 6.7E-57 |
| NCBIfam | NF038228 | NCBIFAM: type IVB secretion system protein IcmH/DotU | - | - | 56 | 266 | 1.8E-41 |
| PANTHER | PTHR38033 | MEMBRANE PROTEIN-RELATED | - | - | 55 | 275 | 1.6E-62 |
| Gene3D | G3DSA:1.25.40.590 | Type IV / VI secretion system, DotU | IPR038522 | Type IV / VI secretion system, DotU superfamily | 57 | 214 | 1.8E-45 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1 | 34 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.