Pseudomonas synxantha BG33R, PseBG33_0474

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF04717	Type VI secretion system/phage-baseplate injector OB domain	IPR006531	Gp5/Type VI secretion system Vgr protein, OB-fold domain	379	453	5.8E-13
PANTHER	PTHR32305	-	-	-	69	515	6.2E-62
Pfam	PF05954	Phage tail baseplate hub (GPD)	-	-	30	323	1.2E-73
NCBIfam	TIGR01646	JCVI: type VI secretion system tip protein VgrG	IPR006533	Type VI secretion system, RhsGE-associated Vgr protein	22	505	9.7E-116
Gene3D	G3DSA:2.30.110.50	-	-	-	20	325	3.0E-85
Gene3D	G3DSA:4.10.220.110	-	-	-	221	280	3.0E-85
Gene3D	G3DSA:2.40.50.230	-	IPR037026	Vgr protein, OB-fold domain superfamily	355	457	4.8E-36
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	189	362	1.36E-37
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	10	184	8.08E-56
SUPERFAMILY	SSF69349	Phage fibre proteins	-	-	443	602	1.41E-28
SUPERFAMILY	SSF69255	gp5 N-terminal domain-like	-	-	365	453	8.11E-30
NCBIfam	TIGR03361	JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain	IPR017847	Type VI secretion system, RhsGE-associated Vgr family subset	10	522	0.0
Gene3D	G3DSA:3.55.50.10	-	-	-	95	188	3.0E-85

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.