Pseudomonas caeni DSM 24390, H591_RS0112550

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01627
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1568 1677 2.88E-24
Coils Coil Coil - - 1921 1941 -
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 783 871 1.7E-12
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 2287 2349 1.5E-19
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 969 1072 0.048
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1330 1426 7.4E-9
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 2207 2349 4.84E-22
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 130 2.88E-20
MobiDBLite mobidb-lite consensus disorder prediction - - 702 723 -
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 2067 2208 6.1E-22
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1570 1661 3.9E-13
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 781 909 2.3E-27
Coils Coil Coil - - 273 293 -
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1568 1665 5.8E-5
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 784 909 0.0
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 972 1062 7.79172E-7
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 126 1.4E-8
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1718 1809 2.0E-10
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 2021 2207 1.4E-52
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2192 2205 7.7E-9
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 2213 2350 1.2E-19
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1568 1666 1.03373E-12
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 2023 2207 8.1E-61
Gene3D G3DSA:3.40.50.2300 - - - 2380 2499 2.0E-39
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 780 878 2.8E-10
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1332 1430 6.9E-15
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1110 1230 3.77E-12
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1712 1844 8.6E-17
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2168 2186 7.7E-9
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 2380 2491 2.9E-27
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1330 1427 3.43187E-15
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 2024 2205 1.26E-34
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 2378 2491 8.0E-37
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1110 1241 2.1E-10
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 780 903 1.81E-25
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 434 552 1.81E-11
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1714 1811 0.01
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 968 1090 7.98E-15
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 2071 2207 1.5E-14
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 107 8.8E-6
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1716 1821 1.44E-14
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1328 1452 1.4E-27
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 946 1062 7.7E-14
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1720 1812 9.4706E-7
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1330 1448 5.1E-27
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 972 1050 1.2E-9
SMART SM00260 chew_2 IPR002545 CheW-like domain 2200 2349 1.4E-28
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1883 2022 1.8E-11
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2112 2126 7.7E-9
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1568 1699 5.1E-27
CDD cd16916 HATPase_CheA-like - - 2030 2205 4.91757E-77
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 2380 2491 3.20882E-31
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 2380 2496 1.25E-36

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.