Pseudomonas sp. URIL14HWK12:I4, H025_RS0126805

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. URIL14HWK12:I4 H025DRAFT_scaffold00008.8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACTCATCGCCTTTTGCGGTGAGCATGATGATCGGGATCTGGTTGTTCTGCTGGCGCAGGCGCTTGCATGCGGACAGGCCATCTTCGCCCGGCAGCATCAG GTCGAGCACCACCAGGTTGAACACCTCGCGCTGCAGCAGGCGGTCCATCTGTTCGGTATTGGGCACTGCACGGGCACGGTAGCCCTTGCTGGTGAAGAAA CGTTCCAGCAGGCTGCTTAGCCCCGGGTCGTCGTCGACGATGAGAATCTTGTCACCTTCAGCGGTGTTTGCGGTGCCGGTCATGAATAACTCCTCTGATA TCGCCGCGCATTATGGCGTAGCCATTGCTGCACGTTGCGTGAGCATTGTTAGCAGATTTTTCCCCGGACGCCAGTTCCGGCTGGCCGGGCGCCATCACCG CAAGCCGTTTGCGATGGGTATAATGCGCGGCTTTCCTCCAGCGCCGCCGGGCGAAAAGCCCACAGGCGACCCCCGTATTCACAAATGTCAGGTGGTTTAC
DNA Sequence for Gene
>H025_RS0126805
ATGGACAGCATCAACAGCCGTATCGCCGAGGAACTGGGCGTACGCCCCCAGCAGGTCGAGGCGGCCGTGGGCCTGTTGGACGAAGGCTCGACCGTGCCTT TCATCGCCCGTTATCGCAAGGAAGTGACCGGTAGCCTGGACGACACCCAACTGCGCCATCTGGAAGAGCGCCTGCGCTACCTGCGCGAACTCGACGAGCG CCGCGCCAGCATCCTGTCCAGCATCGAGGAACAAGGCAAGCTGACCCCGGAGCTGGCCCGCGAAATCAAGCTGGCCGACACCAAGACCCGCCTCGAAGAC CTGTACCTGCCGTACAAGCAAAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTGGGCGAACTGGCCGACGGCCTGTTCAACGACCCGACCC TGGCACCGGAAAGCGAAGCCGCACGCTTCGTCAACGCCGAAAAAGGCGTGGCCGACGTCAAGGCTGCGCTGGAAGGCGCCAAGTACATCCTGATGGAGCG TTTCGCCGAAGACGCCTCGCTGCTCGAAAAACTGCGCAACTTCCTCAAGCAGGAGTCGGTGCTCAGCGCCCGCGTGGTAGCTGGCAAGGAAGAAGAAGGC GCCAAGTTCCGCGACTACTTCGCCCACGACGAACCGCTGCGCACCGCCCCGTCACACCGCGCCCTGGCAATCTTCCGCGGGCGCAACGAAGGCGTGCTGA GCGCCTCGCTGAAAGTGGGCGAAGAGCTGCCTGGCACCCTGCACCCGTGCGAAGTGATGATCGGCAACCACGTCGGCATCGAAAACCGCAGCCGCCCGGC CGACAAGTGGCTGGGAGAGGTGGTGCGCTGGACCTGGAAGGTCAAGCTGTACACCCACCTGGAAACCGACCTGTTCGGCGAGTTGCGCGACAACGCCGAA GGCGAGGCGATCAACGTGTTCGCCCACAATCTGCACGACCTGCTGCTGGCCGCCCCGGCCGGCCCGCGCGCCACCCTGGGCTTCGACCCGGGCCTGCGCA CCGGCTGCAAGATCGCCGTGGTCGATGCCACCGGCAAGCTGCTGGACCACACCACGGTCTACCCGCACGCGCCGAAAAATGACTGGGACCGCACCCTGTC CATCATGGCCGCGCTGTGCGCCAAGCACTCGGTGGAGCTGGTCGCCATCGGCAACGGCACCGCCAGCCGCGAAAGCGACAAGCTGGTGGCCGAGCTGGTC AAAAAATACCCAGCGTTGAAAATCACCAAAATCATGGTCTCCGAAGCCGGTGCTTCGGTGTACTCGGCGTCGGAACTGGCCGCCCGCGAGTTCCCGGACC TGGACGTGTCGATCCGAGGCGCCGTGTCGATCGCCCGCCGCCTGCAGGACCCACTGGCAGAGCTGGTGAAGATCGACCCGAAATCCATCGGTGTCGGCCA GTACCAGCACGACGTGTCCCAGTTGAAACTGGCGCGTAGCCTGGATGCCGTGGTCGAGGACTGCGTGAACGCCGTGGGCGTGGACGTGAACACCGCCTCG GTGGCGCTGCTGACCCGTATTTCCGGCCTTAACGCCACGCTGGCGCAGAATATCGTCGCCCACCGCGATGCCAACGGCCCGTTCGCTACCCGTGCAGCCC TGAAAAAGGTCAGCCGCCTCGGTGAGAAAACCTTCGAACAAGCCGCCGGCTTCCTGCGTGTGATGAACGGCGACAACCCGCTGGACGCCTCTGCAGTACA CCCCGAGGCCTACCCGCTGGTGCAACGCATTGCCGCCGACACCGACCGCGACATCCGTTCGCTGATCGGCGACAGCAGCTTCCTCAAGCGCCTGGACCCG AAAAAGTTCACCGACGAAACCTTCGGCCTGCCGACCGTCACCGACATCCTGCAGGAGCTGGACAAGCCGGGCCGCGACCCACGCCCCGAGTTCAAGACCG CCACCTTCCAGGACGGCGTTGAAGACCTCAAGGACCTGGAGCCGGGCATGATCCTCGAAGGCGTGGTCACCAACGTCACCAACTTTGGCGCCTTCGTCGA CATCGGCGTACACCAGGACGGCCTGGTGCACATCTCGGCGCTGTCGGAAAAGTTCGTCAAGGACCCGCGTGAAGCGGTCAAGGCTGGCGACGTGGTCAAG GTCAAGGTCATGGAAGTGGACATCCCGCGCAAGCGCGTCGGCCTGTCCATGCGCATGAGCGACACACCGGGCGAAAAGGTCGAAGGCAACCGCGGCGGCA ACCGTGGCAATGGCGGCAACCGTCAGCAGCAGGCCCCGCGCCAGCGTGAAACCGCCACTGCCGCACCGGCCAACAACGCCATGGCCGCCCTGTTCGCCAA CGCCAAGCAGCTGAAGAAGAAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGACGTACCACGCGAATACGTCGAGAGCGCCTTCAGCCAACTGCTGGGCTGCCGCCTGCAACGCCTGGAAACCGGTGTTGCCGAGGTAGCCCTGGCGCT TGAGCCGCACTTGCGCAACCGGGGCCAGAAGCTGCACGGCGGGGCGATCTTCAGCCTGGTGGACATCGCCATGGGCCTGGCCTGCTCGGCCAACCATGGC TTTGACCGGCAAAGCGTCACCATCGAGTGCAAGATCAACTACATGCGCGCCGTCAGTGACGGCGAAGTGCTGTGTACCGCCCGCGTGCTGCACGCCGGGC GGCGTACCCTGGTGGTCGACGCTGACGTAGTCCAGGGCGACAAACTGGTGGCAAAAGCGCAAGGAACCTTCGCGGTTCTCTAGCTCACCAAGCTGTATCT GCGGTATTTTCAGCAGTGCGCTGGCACTGCTGGAACCGCGTAAACCAGGCGACAACGCCAGTTCCTTTCTTCCTACCCTTGTAGACCGTTATCTCTACCC
Amino Acid Sequence
>RNA-binding protein
MDSINSRIAEELGVRPQQVEAAVGLLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRYLRELDERRASILSSIEEQGKLTPELAREIKLADTKTRLED LYLPYKQKRRTKGQIALEAGLGELADGLFNDPTLAPESEAARFVNAEKGVADVKAALEGAKYILMERFAEDASLLEKLRNFLKQESVLSARVVAGKEEEG AKFRDYFAHDEPLRTAPSHRALAIFRGRNEGVLSASLKVGEELPGTLHPCEVMIGNHVGIENRSRPADKWLGEVVRWTWKVKLYTHLETDLFGELRDNAE GEAINVFAHNLHDLLLAAPAGPRATLGFDPGLRTGCKIAVVDATGKLLDHTTVYPHAPKNDWDRTLSIMAALCAKHSVELVAIGNGTASRESDKLVAELV KKYPALKITKIMVSEAGASVYSASELAAREFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARSLDAVVEDCVNAVGVDVNTAS VALLTRISGLNATLAQNIVAHRDANGPFATRAALKKVSRLGEKTFEQAAGFLRVMNGDNPLDASAVHPEAYPLVQRIAADTDRDIRSLIGDSSFLKRLDP KKFTDETFGLPTVTDILQELDKPGRDPRPEFKTATFQDGVEDLKDLEPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPREAVKAGDVVK VKVMEVDIPRKRVGLSMRMSDTPGEKVEGNRGGNRGNGGNRQQQAPRQRETATAAPANNAMAALFANAKQLKKK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site