Pseudomonas thermotolerans DSM 14292, H165_RS0116765
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas thermotolerans DSM 14292 H165DRAFT_scaffold00030.30, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCACGCCGATCTTGGCGCCGGGGAAGAAGGACAGGGAAATATCCTTGAGGATTTCACGCTTCGGGGGAACGACCTTGCTCACCCGATGCATGGTGTAGAC GTATTGAGCCAAGACGAAAACCTCGCAGAAAGATTAAATGGCGCAAACCTTGAATCATACGTCAGAGCGTGGGCGCTGAGCCAATCACCAGACAGGCATT CCGCCGCCTCTGCGCCCCGGCCCGCCACCCCGGAGCCTTCTGGAGCGCCCCCTGACTCTCTCCGCCCGCCCACGCCCGGGACTCGCGACGAAAGAATGGC GCCAGACAGTCGACAAAGCCTCTGGCACATCGCCATAATCGCTCGCATTTTGAAGGAGTCCCGGCCCGGCAGCGCCCGACCGGCGGTCTGCCGCCGGACC TTCATGCTCCGGAAAGGATGCCGATACCCCCTGGTACCGCGGATCGGCGCCGGGTACCGCCCAGGGCCGTACCCGTCATGCGACAGCAGGATCTCAACCC
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| DNA Sequence for Gene |
>H165_RS0116765
GTGCCCACGACACCGCCCCTCCCTCCGCTGCGCACCAGCGACGCCCAGCGGCCGGTCAGCCGCTTCCACGCCGCGCTGCACGGCCTGCTGCTGGCCCTCG CCCTGCTGCTGCCGGTGCTGATCGGCTGGCACCTGCACGGGCTGCTGCGCGACGACCTGCCCCCCGTCCCCGGCAAGCTGGCCCTGCTGGGGCTTGCCGG GCTGCTGGTGCTGGTCATCTTCGGCCGCCAGCTGCGCGTGCTGCTGGCCCAGCAGCGCGCCCGGCAGATCATGCACGCGGCCCACCGCCGTCATCGGGGA CTCTTCGAGGGCACCGGCAGCGGCCTCTGCGTCCTCGATCTGAGCGGCCTGCCTGCACAGTTCGCCCGCCTTGGTCTGAACAGCGTCGACGACCTGCAGT GCTGGCTGGCCACCCATCCCAAGCGCCACCACGAGCTGCTCCGCCACCTGCGCCTCAACGACGCCAACCAGATGGCACTGCACCTGCTCGACCTGGATTC CGCCGACGCCATCGGCGCCTACCTGCTCGGCCATGCCCCGCTGCCCCCGGACAGCTTTCGCTGCCGCCTGATGGGCGCCCTGCTCAACGGCGACCGGCTG ATCGAGACGGAACGGCGCATCCTCACCCCACGCGGACACGAGCGCTACCTGTGGTTCCAGGTGTTGATCCCCGAGCAGGCCAGCGACCTCGACTCGGTGC CGCTGAGCATCCACGACGTCACCGCCCGCAAGCGCATCGAACTGTCGCTGGTGGAACGCGAGCGCTTCTGGTCCCAAGTGATCAACAGCCTACCCGACAC TCTCTACGTCCACGATATCCGCAATGGCCAGGTGCTGTTCCACAACCACCGCCTCGGCCCGGAGCTGGGCTACAGCCGCGACGAGCTGCGCGCCCTGGGC GAGCGCATCTGGGAGAAGATCCTCCACCCCGACGACCTGGAGCTGTACCAGCGGGTGCGCAACGCCCAGCAGGTGATCGGCGCCGGCCAGCTGCTCACCT GCCAGCTGCGCTGGCGGCACCGCAACGGCACCTGGCGCTGGTTCGACATCCGCGAGCAGGCCCTGAGCCGCGACGAGCACGGCCGGGTCAGCCGGCTGGT CGGGGTGGCCAAGGACATCACCGAGCAGATCGAGGCCGACCAGTCGCTGCGCGCCAGCGAGCAGCGCTACCGGCTGCTGGCGGAGAGCATCAGCGACATC ATCTACTCCACCGACCGCGACTTCGAGCTCAACTACGTCAGCCCCTCGGCACAGACCGTGCTCGGCTATGACAACGACTGGCTGCTGGAGAACGGCCTGC ACGGCATCCTCGCCAACCCCGTCCAGCTGGAGGGCGCCTACGCCATCCGCGACCACCTGCGCGACGCCCTGGGCGACCCCCAGCTGCTGGCCGAACTGCG CAAGCAGCTGCAACCGCAGATGTTCGTGTTCGACGCCCTGCACGCCGATGGCCGCAAGATCCCCATGGAACTGCGCCTGAGCCTGATGTGGGACGCCAAT GGCGGCTTCGAGGGCCTGCTCGGCGTAGCCCGCGACGTCAGCATGCAGCGGCGCGCCGAGAAGGAGCTGCGCATGGCCGCCACGGTGTTCGCGCACTCCA CCTCGGCGATCCTGGTCACCGACCCGGCCGGCTACATCGTGCAGGTCAACGAGGCCTTCACCCGGGTCACTGGTTACCAGCCCGCGGAGGTGCTCGACCA GCGCCCCGGCATACTCACCGCCGACCGCCAGCAGGCCCAGCACCTGGAATACCTGCTGCGTCAGCTCAGCCTGCAGGGCAGCTGGGAAGGCGAGCTGTGG CTGAAGCGCCGCAACGACAAGCCCTATCCGGCCTGGATGGGCATCACCGCGGTACAGGACGACGAGGGCGACCTGGTCAGCTACGTGTGCTTCTTCAGCG ACATCAGCGAGCGCAAGGCCAGCGAGCAGCGCATCCACCGCCTGGCCTACTACGACACCCTCACCCACCTACCCAACCGCACCCTGTTCCAGGACCGCCT GCACAACGCCCTGCAGTACGCCGAGCGCAACCGGGAGTGGGTGGTGCTGATGTTCCTCGACCTGGACCGCTTCAAGCCGATCAACGACTCCCTCGGCCAT GCCGCCGGCGACCGCATGCTCAAGGACGTGGCGATCCGCCTGACCGCCTGCGTCTCCGAAGACGACACCGTGGCGCGCATGGGCGGCGACGAGTTCACCC TGCTACTGCAACCGCGCAGCAGCCGCGAGAACGCCCTGAACCGCGCCATCCACGTCGCCGAGCAGATCCTCGCCAGCCTGACCCGACCGTTCATCCTCGA AGGCCGCGAGTTCTTCGTCACCGCCAGCATCGGCATCGCCCTGAGCCCCCAGGACGGCAGCGAGCTGAGCCAGCTGATGAAGAACGCCGACACCGCCATG TACCACGCCAAGGAGCGCGGCAAGAACAACTTCCAGTTCTACCAGAAGGAGATGAACGCCACCGCCCTCGAGCGCCTAGAACTGGAGAGCGATCTGCGCC ACGCCCTGGAGCAGAACGAGTTCGTCCTCCACTACCAGCCGCAGTTCAGCGGCCAGGGCCAGCACCTGAGCGGCGCCGAAGCGCTGCTGCGCTGGCACCA TCCGAAGCGCGGCCAGGTGCCCCCGGACCAGTTCATCCCGGTGCTCGAGGAGCTGGGCCTGGTGGTGCAGGTCGGCGACTGGGTGCTCGGCGAGGTCTGC CGCCAGCTCCGCCACTGGCAGGACCGCGGCATCCACATTCCCAAGGTGGCGGTCAACCTGTCGCCCCGGCAGTTCGCCGAGGGCGGCCTGAGCGAGCGTA TCGCCGCCATCCTCGCGGAAACCGGAGTGGCCCCGGGCTGCCTAGAGCTGGAGATCACCGAAAGCATCCTGATGCACGATGTCGACGCTGCCATGCACAC CCTGGCCGAGCTCAAGCACCTCGGCCTGTCGGTGGCGGTGGACGACTTCGGCACCGGCTACTCCTCGCTCAACTACCTGAAGCGCTTCCCCATCGACGTG CTGAAGATCGACCGCAGCTTCGTCGACGGCCTGCCGGACGGCGAGCAGGACGCGCAGATCGCCCGCGCCATCATCGCCATGGCCCACAGCCTGAACCTCA CGGTGGTCGCCGAGGGCGTGGAAAGCCACGCCCAGCTGCGCTTCCTCCGCGAGCACGGCTGCGACAAGGTGCAGGGCTTCCTGCTCGGCCGGCCGATGCC CGCCCCGCAGCTAGCCGCACAGTTCGGCGGCACTGCGCTGTTCATGCTCGAGCTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCCGGCGCCGCCAGGCCGCGGAGCCCGGGATACGCGGGCGGTCCATGAGGTCCGCTTGTCCGCGACGTGACCGTCCTTCATACCCCTCTTGCGGCCAG ATGGGGTAAAATGCGCGACCTTCTCCCCGCACCGATCCTTAGAGGACCGCCATGTTCAGCCGTGATTTGACCCTCGCCCGCTACGATGCCGAACTCTTTG CCGCTATGGAGCAGGAAGCCAAGCGTCAGGAAGAGCACATCGAGCTCATCGCCTCCGAGAACTACACCAGCCCGGCGGTGATGGAAGCCCAGGGCAGCGT GCTGACCAACAAGTACGCCGAAGGCTATCCGGGCAAGCGCTACTACGGCGGTTGCGAGTTCGTCGACATCGTCGAGCAGCTGGCCATCGACCGCGCCAAG CAGCTGTTCGGCGCCGACTACGCCAACGTCCAGCCGCACTCCGGCTCCCAGGCCAACGCCGCCGTCTACCTGGCGCTGCTGAACCCGGGCGACACCATCC
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| Amino Acid Sequence |
>hypothetical protein
MPTTPPLPPLRTSDAQRPVSRFHAALHGLLLALALLLPVLIGWHLHGLLRDDLPPVPGKLALLGLAGLLVLVIFGRQLRVLLAQQRARQIMHAAHRRHRG LFEGTGSGLCVLDLSGLPAQFARLGLNSVDDLQCWLATHPKRHHELLRHLRLNDANQMALHLLDLDSADAIGAYLLGHAPLPPDSFRCRLMGALLNGDRL IETERRILTPRGHERYLWFQVLIPEQASDLDSVPLSIHDVTARKRIELSLVERERFWSQVINSLPDTLYVHDIRNGQVLFHNHRLGPELGYSRDELRALG ERIWEKILHPDDLELYQRVRNAQQVIGAGQLLTCQLRWRHRNGTWRWFDIREQALSRDEHGRVSRLVGVAKDITEQIEADQSLRASEQRYRLLAESISDI IYSTDRDFELNYVSPSAQTVLGYDNDWLLENGLHGILANPVQLEGAYAIRDHLRDALGDPQLLAELRKQLQPQMFVFDALHADGRKIPMELRLSLMWDAN GGFEGLLGVARDVSMQRRAEKELRMAATVFAHSTSAILVTDPAGYIVQVNEAFTRVTGYQPAEVLDQRPGILTADRQQAQHLEYLLRQLSLQGSWEGELW LKRRNDKPYPAWMGITAVQDDEGDLVSYVCFFSDISERKASEQRIHRLAYYDTLTHLPNRTLFQDRLHNALQYAERNREWVVLMFLDLDRFKPINDSLGH AAGDRMLKDVAIRLTACVSEDDTVARMGGDEFTLLLQPRSSRENALNRAIHVAEQILASLTRPFILEGREFFVTASIGIALSPQDGSELSQLMKNADTAM YHAKERGKNNFQFYQKEMNATALERLELESDLRHALEQNEFVLHYQPQFSGQGQHLSGAEALLRWHHPKRGQVPPDQFIPVLEELGLVVQVGDWVLGEVC RQLRHWQDRGIHIPKVAVNLSPRQFAEGGLSERIAAILAETGVAPGCLELEITESILMHDVDAAMHTLAELKHLGLSVAVDDFGTGYSSLNYLKRFPIDV LKIDRSFVDGLPDGEQDAQIARAIIAMAHSLNLTVVAEGVESHAQLRFLREHGCDKVQGFLLGRPMPAPQLAAQFGGTALFMLEL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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