Pseudomonas vranovensis DSM 16006, H621_RS0122765
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas vranovensis DSM 16006 H621DRAFT_scaffold00007.7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AATCCAGGCCTCGCTGGCAGGGGAAGCCGGCCGCGGCTTTGCCGTAGTAGCCGACGAAGTTCAGCGTCTGGCCGAACGCTCGTCGTCGGCCACCCGCCAG ATCGAGGCACTGGTGCGCACCATCCAGGCCGATACCAACGAAGCGGTCATTTCCATGGAGCAGACCACGGCTGAAGTGGTACGCGGTGCGCGCCTGGCGC AGGATGCGGGCGTGGCCCTGGCAGAGATCGAAGGGGTATCGCAGACCCTGGCCGAACTGATCCACAGCATCTCCGACGCCGCCCAGCTGCAGACCTCATC GGCTGGGCAGATCTCGCATACGATGGCTGTGATCCAGCAGATCACCTCACAGACGTCGGCAGGCTCCAGCGCGACGGCCGAAAGCATTGGCGACCTGGCC CGCATGGCCAGCGAAATGCGTCGCTCGGTGTCCGGCTTCACGCTGCCACCGACGCCGCCACGTTGAGCGCGCGCCAGTGAGCATGGCAACGGGAGCAGAT
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| DNA Sequence for Gene |
>H621_RS0122765
ATGGCTGAGCTGCATGACACGGTAGCCCTCGCCTGGGTCAAGGGCGCCATCAGTGACTGCCTGGCCCAGGCGCGCCTGGCACTGGAACAGTTTTCCGCCG AGGGCGGGGATGAAGACGCCCTGGCCGGATTTGTCGACAACCTGCACCAGGTGCGCGGTTGCCTGGTGATGCTGGAGCTGAGCGGCGCCGCGCTGCTGGC CGAAGAGCTGGAGCAGCTGGGGTGGGCGCTGCGGGCCAAGCGCGTTGGTCAGCGAGGCGAAGCGCTGGGCGCGCTGTTTCGCGGCCTTGAGCAATTACCG TTGTACCTCGACCGCCTGCGCAGTGCCCGGCGCGATCTGCCGCTGGTGGTACTGCCAGTGCTCAACCAGCTGCGCGCGGAGCGCGGGGTCGAGCCTCTGG GGCAGGGCAGCCTGTTGACGACAGCGCCAGCACCGGCTGAAGATCTGGCCAATCTCGACCTGTCCCTGAGTGCCTTGCGCGAGCGTTTGCACGCAGGCTC CGACCGCGACGCCATGCGTTCGGTGGTGGCGGCGTTGTGTGAGGACCTGATGCGGGTCAAGGAACGCCTGGACCTGTTTGTGCGCAGCGATCGCCAGCGC CTGGATGACCTGCAGCCGTTGCTCTCGCCGCTGCGGCAAATTGCCGACACGCTGGCGGTGCTGGGCTTCGGCCAACCACGGCGGGTCATTATCGACCAGG TGCTGGTGTTGCAGAGCCTGGCCCAGGGCCAGCGCGCGCCGGATGACGCGGTGCTGATGGATGTCGCCGGAGCGTTGCTGTATGTCGAGGCGACGCTGGC CGGCATGGTGGGGCCCCTGGAGCATCACCCCAGCCAGACCTCGCTGCCGGGCACCGACCTGGCCGAGATTCGTCAGTTGGTGCTAGAGGAAGCCAACGCG GTGCTGCAGCAGGTCAAGGACCAGATCGGTGACTCGCTGGAGGCCGGCTGGCAGCCCCATCGGATGCAACCCTTGCCCGGTTTGCTGCAGCAGGTACGTG GCGCCCTGGCCATGCTGATGTTGCCGCGACCAGCGGCCTTGATGGGGCGCTGTGGCGACTATGCCCAGGCCAATTTGCTTGGCACCGCTGCACCGGACAC CACAGCCCTGGCGCACCTGGCCGACGCCCTGAGTGCCTGTGAGTGTTACCTGCAGTGGCTGATTGCCGACCCGCAGGCCAACCCCTGGTATTTTCTCGAG GCTGCCCAGGCAAGCCTCGCTGCGTTGGGTTATGCGCCTGAGCCGGTGCCGGCGGTGGAAGCCCACGTGCCGGCTATTGAGGAGCCGGCAGTCGATGAAG AACTGCGCGAGGTGTTCCTGGAGGAGGCCGAAGAGCTGTTGCCGCAACTCAATGCGCAATGGGCGCGCTGGCAGGCCAATCCGGCCGAGCGCGATGCGTT GGTAGAACTGCGCCGCGGACTTCACACCCTCAAGGGCAGTGGCCGCATGGTGCGGGCTCAGGGGTTGGCCGAGCTGGCCTGGGCGGCCGAGCATTTTCTC AACCGGGTGCTGGAAGGTCGCGTGGAAATTGGTGCCGCGCCCCTGGCTGGCTTGCAACAGGTACTGGATCTGATCCCCGGACTGCTGGCGGCCTTTGCCA AGGGCCAGTCGCAAGCTGCAAAAGACATCGAGCAACTGGCATTGCGCCTGCATGCACTGGCGATGAATGACGCGCCCCATGAGGCGGCTGGCAACGAGTC GATTGACCCTCAGTTGCTGGAGATCTTCCGCAACGAGGCCCAGGGGCATCTGGCGAGCCTCGACAGCTTTCTCGAACTGGCCGAACAGCATTTGCCGCAG CCGGTCAGCGATACATTGCAGCGCGCCCTGCATACCCTCAAGGGCAGTGCCGCCATGGCCGGTGTCGCGTCCATCGCCGAACTGGCCGGGGCCCTCGATC TGCTGGCGCGGGAGTTCAAGGCCCACCAACTGGCTTTCGACCTTGAGGAAATCTACCTGCTGGAAAGCGCCGAGCCGCTGTTGAAACGCGGACTTGAGCA ACTGACCAGCGCACCGCTGGCTCCAATAGTCGGCGCATCGACCCTGATCGAAGAAATCCACCAGTTGGTCGAGGCGCGCTTGCAGGCGCTGCTGGAGGCT CCGAGCCATGGCGTGCGGATCAAGCGCGACCCACAGTTGATCGCCAGCTTCCTGGCCCAGGGCATGGATATCCTGCTGGATGCCGAGTCGCTGTTGCTGC GCTGGCAGGAACACCCGGGTGAGCGCCAGGAACTCACCGCGCTGCTCGATGAGTTGACCACCCTGGGCCAGAGTGCTCACCTGGCCAACCTGTGGCAGGT GGATGACCTGTGCGAGGCGCTGCTGGACCTGTACGGTGCGGTCGAGGAAAGCAGCCTGGCTGTCAGCGGGCACTTCTTCGAGGAGGCGCAGCATGCCCAT GAGGCGCTGATCGACATGCTCGACCAGATCGCCGCAGGCCAGGAGGTAGACCCGCGGCCGGAACGTCTGAAGGCCCTGCGTGAGCTGCTTGACGAGGCAT TGGCACCCGATGCCACGGGTTTGATCAGCACCCGCAATGGCCAGGCAAACATCGCCGAACTGGGTGCCGCCACGGCAGCCCTGGACGCGGAACCTGCCAT GGTCGAGCTGTTTCTCGAAGAAGCCTGCGATGTGCTTGAAAGCGCTGACCAGGCGTTGGCCCGTTGTTTGGCCGAGCCCGACAATGTGTCGGCCCTGTCG TCGCTGCAGCGCGATCTGCAAACCCTCAAGGTCGGGGCGCAGATGGCCGCCATAGGCGGGGTTGAAGTACTGGCCCGGGAGCTGGAGCTGCTCTACGAGG GGCTGGTCGATCGCCGTTTCAGTCTGACCCCTGAGTTGGGCGATCTGCTCAGGCGCAGCCACGCCCAGCTGGCCCAGGTACTTGCCGCGCTGCAGCAAGG GCAGGCGCCTGCAGCCGCCGTCGAGTTGCTGGCGGCGCTGCGTGAGTTTCGCCATGAGGCGCCACCGGCCGTGGTGGCGGACAAACCTGCCGACCCGGTG CAGGAGGCGGGCGACAAGGAGTTGCTGGAGATCTTCCTTGAAGAGAGTTTCGATATCGTCGAAAGCTCGGGTGCAGCTTTGCTGCGCTGGCAGGCCGAGC CACGCAATGGCGTCGAGGTGGAGAATCTGTTGCGCGACCTGCATACCCTCAAGGGCGGTGCGCGCATGGTCGAGATTGCGCCGATAGGCGACTTGGCCCA TGAACTGGAGTTTCTTTACGAACTGCTGGCCGCCGGGCAGTTGCAGCCCAGTGCAGCGTTGTTCAGCCTGTTGCAGAACTGCCATGACCGCCTGGCGCAT ATGCTCGATGCCGTACGCCTGCACCAGCCGCTGCATGCCGCCACGGCACTGATCGACTACATTCGCAATTTCAGCAGCGCCGCCCTGGCCGATACCGCAG CCCAGCATTCCAACCCGGATGCAGCACCGGTGGAATTGCCGGTGGCTGCACCTGAGCGTGGGCCGGTGGACATGGTCAAGGTGGCATCGGAGCTGCTCGA TGACCTGGGTAACCTGGCCGGTGAGCATTCGATCATTCGCGGGCGTATCGAACAGCAGGTCAATGATGCCCAGGTAGCGTTGAACGAAATGGAAACCACC CTGGAGCGCATGCGCGATCAATTGCGCCGCCTGGATACCGAAACCCAGGGGCGGATTCTCAGTCGCCAGCAAGCTGATGGCGACAACCAGGCCTACGACG ACTTCGATCCGCTGGAAATGGACCGTCACTCGCAGTTGCAGCAACTGTCCAGGGCGCTGTTCGAATCGGCGTCCGACCTGCTCGATCTCAAGGAAACCCT GACGGTACGGGCTCAGGATGCCCACAGCCTGTTGCAACAACAGGCGCGGGTGAACAGCGAGCTGCAGGAAGGCCTGATGCGCACGCGCATGGTGCCGTTC GAGCGCCTGGTGCCACGCTTGCAGCGGGTCGTGCGGCAGGTGGCCAGCGAGCTGGGCAAACAAGTCGAGCTGGTGGTGGGCAATGCCGAGGGCGAGATGG ACCGCAGCGTGCTGGAGCGCATGGTGGCGCCGCTTGAACATATGCTGCGCAATGCCGTCGACCATGGCCTGGAGGCCCGCGATGTGCGTCTGGCGGCGGG TAAACCGGAGCAGGGGCTGATTTCGCTGAACTTGCTGCATGAAGGCGCCGACATCGTCATCGAAATGACCGACGACGGTGCGGGCGTGCCGCTGGAGGCG GTACGGCGCAAGGCGATCAAGCGCGGCTTGCTCGACCCAGTGGCGGTGCTCAGTGATCACGAGATCATGCAGTTCATTCTGCAACCGGGCTTCTCCACGG CGGAGAAGATCACCCAGATATCCGGACGCGGCCTTGGCATGGACGTGGTGCATGAAGAGGTCAAGCATCTGGGCGGCTCGATGGTGATCGAGTCCAATCC GGGCAAGGGGGCACGCTTTTTGATTCGTCTGCCATTCACCGTCTCGGTCAACCGGGCGTTGATGGTGCAGTTTGGCGACGAGCAATATGCCGTACCGCTC AACACCATCGAAGGCATCGTCAGGGTGCCGCCTGCGGAGCTGGAGGCCTGTTACCAGCTCGAGTCGCCCCATTACGAATATGCCGGGCATCGCTACGCGC TTCATTATCTGGGTGAGCTGCTGCAAGGGGCGGTGCAACCGCGCCTGCTTGGCCAGAGCCTGCCACTGCCGGTGCTGCTGGTGCATTCCCAAGAGCAGCA GTTCGCCATCCAGGTCGACAGCCTGGCCGCCAGTCGCGAAATTGTGGTCAAAAGCCTGGGGCCGCAGTTTGCCGGTGTCCAGGGCTTGTCCGGGGCGACT TTGCTGGGTGATGGCCGGGTGGTGCTGATTCTGGACTTGCTGGGACAGTTGCGCGGTCTGCAGCAGCGACAGTTCCAGCAAGCGGGCAGCAATGCCAGCC TTCGCCGCCAGCAGATCGAGCGGGCGCCGAAGCGGCCGTTGCTGGTGATGGTGGTCGATGACTCGGTGACGGTACGCAAGGTCACGGGGCGCCTGCTGGA GCGCCACGGCATGAACGTGCTGACGGCCAAGGACGGTGTCGATGCCATGGCGCTGCTGCAGGAGCACCGTCCCGACATTCTCCTGCTGGACATCGAGATG CCGCGTATGGACGGCTTCGAGGTCGCCACCCAGATACGCCATGACCCGGAGCTCCAGGACCTGCCGATCATCATGATCACGTCGCGGACCGGGCAGAAGC ACCGCGACCGGGCCATGTCCATCGGCGTCAACGACTACCTGGGCAAGCCTTATCAAGAATCGGTGCTGCTGCAGAGCATCGCCCTGTGGAGTCGCCGCCA TGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACAATCGGTACGTAACGGCCGCCGCACGAGCTTGACTGGGCTGCTGTTGGCCCTCGGCGATCGCTGCCTGGTGTTGCCCAACGTCGCGGTGGCCGAATTG ATCGGTTACCAGGTTGGCACCCCAGCCGAGCAACAACCGGCGTGGATGCTCGGCTGGATCGACTGGCGCAACCAGCGCTTGCCGTTGCTCAGTTTCGAGG CCGCGTGCGGGGGCTCGGTGAAGGTCGGCGAGCGGGCACGGATTGTGGTGCTCAATGCCTTGGGCAGCAGCCGCCAGCGTTTTATCGCCTTGCTGGTGCA GGGTATTCCGCGTTCCTGCAAGCTCGACAGCCAACTCAACTATGTCGATGTGCCGCTGGCGCCACTGGAGCTGGCGGCGGTGCAGGTCGGCGATCAGGTC GCCAAAGTGCCGGACCTTCCAGCACTGGAACGCTTGCTGGAGGACGCAGGGCTGGTTTGAAACATTTGCCTGTGTAGGATGGGAAGTCAGTCCGTTGTCT
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| Amino Acid Sequence |
>histidine kinase
MAELHDTVALAWVKGAISDCLAQARLALEQFSAEGGDEDALAGFVDNLHQVRGCLVMLELSGAALLAEELEQLGWALRAKRVGQRGEALGALFRGLEQLP LYLDRLRSARRDLPLVVLPVLNQLRAERGVEPLGQGSLLTTAPAPAEDLANLDLSLSALRERLHAGSDRDAMRSVVAALCEDLMRVKERLDLFVRSDRQR LDDLQPLLSPLRQIADTLAVLGFGQPRRVIIDQVLVLQSLAQGQRAPDDAVLMDVAGALLYVEATLAGMVGPLEHHPSQTSLPGTDLAEIRQLVLEEANA VLQQVKDQIGDSLEAGWQPHRMQPLPGLLQQVRGALAMLMLPRPAALMGRCGDYAQANLLGTAAPDTTALAHLADALSACECYLQWLIADPQANPWYFLE AAQASLAALGYAPEPVPAVEAHVPAIEEPAVDEELREVFLEEAEELLPQLNAQWARWQANPAERDALVELRRGLHTLKGSGRMVRAQGLAELAWAAEHFL NRVLEGRVEIGAAPLAGLQQVLDLIPGLLAAFAKGQSQAAKDIEQLALRLHALAMNDAPHEAAGNESIDPQLLEIFRNEAQGHLASLDSFLELAEQHLPQ PVSDTLQRALHTLKGSAAMAGVASIAELAGALDLLAREFKAHQLAFDLEEIYLLESAEPLLKRGLEQLTSAPLAPIVGASTLIEEIHQLVEARLQALLEA PSHGVRIKRDPQLIASFLAQGMDILLDAESLLLRWQEHPGERQELTALLDELTTLGQSAHLANLWQVDDLCEALLDLYGAVEESSLAVSGHFFEEAQHAH EALIDMLDQIAAGQEVDPRPERLKALRELLDEALAPDATGLISTRNGQANIAELGAATAALDAEPAMVELFLEEACDVLESADQALARCLAEPDNVSALS SLQRDLQTLKVGAQMAAIGGVEVLARELELLYEGLVDRRFSLTPELGDLLRRSHAQLAQVLAALQQGQAPAAAVELLAALREFRHEAPPAVVADKPADPV QEAGDKELLEIFLEESFDIVESSGAALLRWQAEPRNGVEVENLLRDLHTLKGGARMVEIAPIGDLAHELEFLYELLAAGQLQPSAALFSLLQNCHDRLAH MLDAVRLHQPLHAATALIDYIRNFSSAALADTAAQHSNPDAAPVELPVAAPERGPVDMVKVASELLDDLGNLAGEHSIIRGRIEQQVNDAQVALNEMETT LERMRDQLRRLDTETQGRILSRQQADGDNQAYDDFDPLEMDRHSQLQQLSRALFESASDLLDLKETLTVRAQDAHSLLQQQARVNSELQEGLMRTRMVPF ERLVPRLQRVVRQVASELGKQVELVVGNAEGEMDRSVLERMVAPLEHMLRNAVDHGLEARDVRLAAGKPEQGLISLNLLHEGADIVIEMTDDGAGVPLEA VRRKAIKRGLLDPVAVLSDHEIMQFILQPGFSTAEKITQISGRGLGMDVVHEEVKHLGGSMVIESNPGKGARFLIRLPFTVSVNRALMVQFGDEQYAVPL NTIEGIVRVPPAELEACYQLESPHYEYAGHRYALHYLGELLQGAVQPRLLGQSLPLPVLLVHSQEQQFAIQVDSLAASREIVVKSLGPQFAGVQGLSGAT LLGDGRVVLILDLLGQLRGLQQRQFQQAGSNASLRRQQIERAPKRPLLVMVVDDSVTVRKVTGRLLERHGMNVLTAKDGVDAMALLQEHRPDILLLDIEM PRMDGFEVATQIRHDPELQDLPIIMITSRTGQKHRDRAMSIGVNDYLGKPYQESVLLQSIALWSRRHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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