Pseudomonas vranovensis DSM 16006, H621_RS0110550
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas vranovensis DSM 16006 H621DRAFT_scaffold00004.4_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATGAGCGCCAAGACCGCCAGCTTCATCATGACCGGCGCGCTGTTCCTGTACATGTGCATGCAGCCGCTGTTCGGCATGCTCTCCGACCGTATTGGCCGG CGTAATTCGATGCTCTGGTTCGGCGCCCTGGGCACCTTGTGCACGGTGCCGATCCTCATGACCCTGAAGACCGTCACCAGCCCGTTCCTGGCCTTCGTGC TGATCACCCTGGCGCTGTGCATCGTCAGTTTCTATACCTCCATCAGTGGCCTGGTCAAAGCCGAGATGTTCCCGCCGCAGGTGCGCGCGCTGGGCGTAGG CCTGGCCTATGCGGTGGCCAACGCCGTGTTTGGCGGTTCGGCTGAATACGTGGCGCTGGGGTTGAAATCCATGGGCCTGGAAAACACTTTTTACTGGTAC GTTACCGCCATGATGGCGATCGCCTTCCTGTTCAGCCTGCGCTTGCCGAAACAGGCAGCCTACCTGCACCACGACCATTGACCTGTTGAAGGACTTGTAG
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| DNA Sequence for Gene |
>H621_RS0110550
ATGAACCCGCGACCGGGCAATCAGCTGTTCGATGCCTACTTCACCGCAGTCGCCATGCGTGAAGTATTCAGTGACCGAGGCCGGGTGCAGGGCATGCTCG ATTTCGAGGCTGCCCTGGCCCGGGCCGAAGCGGCCGTGGGGGTGATTCCGCAGGTTGCGGTGGCACCCATCGAGGCCGCCTGCCAGGCCGAGCACTATGA CTATGCCGCGCTGGCCGAGGCCATCGGCATTGCCGGCAACTCGGCCATCCCGCTGGTCAAGGCACTGGGCAAGGTGATCGCCAGCGGAGTGCCCGAGGCC GAGCGCTATGTACACTTGGGCGCCACCAGCCAGGATGCGATGGACACCGGGTTGGTCCTGCAACTGCGTGCCGCCCTGGGCCTGATTGAAGACGACTTGC AGCGCCTGGCCGACGCCCTGGCGCATCAGGCCCAGGCCCATGCCGATACACCGTTGGCCGGACGTACCTGGTTGCAGCATGCAACGCCAGTCACCCTGGG CATGAAGATCGCTGGCTGGCTGGGCGCCTTGACCCGTCACCGCCAGCGTTTGCAGGAGCTCAAGCCACGCTTGCTGACACTGCAGTTCGGCGGCGCCTCC GGCACCCTGGCGGCACTGGGTGACAAAGCGCTGCCGGTGGCCGAAGCCCTGGCCCAGCAACTGGACCTGCAACTGCCCGAGCAACCCTGGCACACCCAGC GCGACCGCCTGGTGGAGTTCGCCTCGGTGCTGGGCCTGATCGCCGGCAGCTTGGGCAAGCTGGGTCGCGACATCAGCCTGCTGATGCAGACAGAAGCGGC GGAAGTGTTCGAACCGTCTGCACCGGGCAAGGGCGGATCCTCGACCATGCCGCACAAGCGCAACCCGGTGGGCGCTGCCGTATTGATCGGCGCTGCCACG CGAGTGCCGGGGCTGGTGTCGACGATGTTTGCCGCCATGCCTCAGGAGCACGAGCGCAGCCTGGGCTTGTGGCATGCCGAATGGGAGACCCTGCCGGAAA TCTGCTGCCTGGTTTCCGGTGCGTTGCGCCAGGCGCAGATCATCGCCGATGGCCTGCAGGTGGATGCCGAACGCATGCGCCAGAACCTCGACCTGACCCA GGGCCTGGTGCTGGCCGAAGCGGTGAGCATCGTTTTGGCTCAACGCCTGGGCCGCGACAGCGCCCATCATTTGCTGGAACGCTGCTGCAAGCGCGCAGTG GCCGAGCAGCGACACCTGCGCGCCGTGCTCGGCGACGACCCACAGGTGAGCGCCGAACTTTCACCCGACGAACTCGATCGTCTGCTCGACCCCGCCCACT ACCTTGGCCAGGCTCGCGCCTGGGTCGAGCGGGCGCTGGCCGAACATCACCGTTTCAATGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGAGGCTGCAGTGGCACAGGTACAACTCGCCGATGGCGCACTCAACTACCAACTCGACGGGCCTGAAGGCGCGCCGGTGCTGGTGCTGTCCAACTCGCT GGGCACCGACCTGCACATGTGGGACACCCAGGTGCCGGCCTTTACCGCGCACTTTCGTGTGCTGCGCTACGACACCCGTGGCCATGGCGGTTCGCTGGTG ACCGATGGACCGTACAGCATCGAGCAACTGGGCCAGGATGTACTGGCGCTGCTCGACGCGCTGAAGATCGAACGCGCGCATTTCTGCGGCTTGTCCATGG GCGGGCTGATCGGTCAGTGGCTGGGCATCAATGCCGGCGAGCGCTTGAATCGCCTGGTCGTTTGCAACACCGCCGCCAAGATCGGCTCGCCAGATACCTG GAACCCGCGTATTGAAATGGTCCTGCGTGATCGCCAGGCGGCGATGGTCGGTTTGCGCGATGCCTCGATCGAGCGCTGGTTCACCCCGGGCTATTCCTCG
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| Amino Acid Sequence |
>3-carboxy-cis,cis-muconate cycloisomerase
MNPRPGNQLFDAYFTAVAMREVFSDRGRVQGMLDFEAALARAEAAVGVIPQVAVAPIEAACQAEHYDYAALAEAIGIAGNSAIPLVKALGKVIASGVPEA ERYVHLGATSQDAMDTGLVLQLRAALGLIEDDLQRLADALAHQAQAHADTPLAGRTWLQHATPVTLGMKIAGWLGALTRHRQRLQELKPRLLTLQFGGAS GTLAALGDKALPVAEALAQQLDLQLPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLIGAAT RVPGLVSTMFAAMPQEHERSLGLWHAEWETLPEICCLVSGALRQAQIIADGLQVDAERMRQNLDLTQGLVLAEAVSIVLAQRLGRDSAHHLLERCCKRAV AEQRHLRAVLGDDPQVSAELSPDELDRLLDPAHYLGQARAWVERALAEHHRFNA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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