Pseudomonas vranovensis DSM 16006, H621_RS0110550

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019619 3,4-dihydroxybenzoate catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02426
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48557
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 279 295 5.1E-26
Gene3D G3DSA:1.10.40.30 - - - 367 454 7.3E-31
PANTHER PTHR43172 ADENYLOSUCCINATE LYASE - - 8 450 2.9E-123
SMART SM00998 ADSL_C_2 IPR019468 Adenylosuccinate lyase C-terminal 367 446 2.5E-28
PRINTS PR00145 Argininosuccinate lyase family signature - - 103 125 2.1E-12
PRINTS PR00145 Argininosuccinate lyase family signature - - 234 258 2.1E-12
Gene3D G3DSA:1.20.200.10 Fumarase/aspartase (Central domain) - - 5 366 1.1E-119
PRINTS PR00145 Argininosuccinate lyase family signature - - 144 164 2.1E-12
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 149 167 5.1E-26
FunFam G3DSA:1.20.200.10:FF:000014 3-carboxy-cis,cis-muconate cycloisomerase - - 3 364 0.0
Pfam PF10397 Adenylosuccinate lyase C-terminus IPR019468 Adenylosuccinate lyase C-terminal 368 445 1.8E-19
NCBIfam TIGR02426 JCVI: 3-carboxy-cis,cis-muconate cycloisomerase IPR012789 3-carboxy-cis,cis-muconate cycloisomerase-like 9 352 0.0
Pfam PF00206 Lyase IPR022761 Fumarate lyase, N-terminal 16 304 9.5E-73
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 104 122 5.1E-26
FunFam G3DSA:1.10.40.30:FF:000007 Adenylosuccinate lyase - - 367 448 4.9E-24
CDD cd01597 pCLME - - 9 448 0.0
PRINTS PR00145 Argininosuccinate lyase family signature - - 279 295 2.1E-12
Coils Coil Coil - - 342 362 -
SUPERFAMILY SSF48557 L-aspartase-like IPR008948 L-Aspartase-like 9 450 4.4E-126
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 234 261 5.1E-26

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.