Pseudomonas resinovorans DSM 21078, G559_RS0112410
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans DSM 21078 G559DRAFT_scaffold00011.11_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCGAAATCTGGTCGGTGCTGTCATGCAAGAGGATCAACTATTCGCTGGGTCGCTGGCAGAGAACATCGCCAGCTTCGATCCCGATGCAAGTCAGGAGC GGATTGAAGAGGCAGCCCGTCAGGCCCATATCCACAAGGCGATTGCAAAGATGCCCATGGGCTATCAGACATTGATGGCTGAAATGGGAAGCGGGCTGTC AGGCGGGCAGCGGCAGCGGGTTCTACTGGCTCGGGCTCTGTACAAGCAGCCACGCATCTTGGCCATGGATGAAGCTACCAGCCATCTGGATCTGCACAGC GAAAAGCATGTAGTGACGTCATTGCACCAGATGGCAGTTACCCGGATCACAATAGCCCACCGACGTGAAACCATTGCTTTTGCCAAGCGCCTTGTCTGTC TGGAGCGGGGCTGCATCGTGGAAGACGTTCGTCTCGATGAGAGCCAAGTTTCGGCATGATATGGGGGAAACGAGGATGGCTGGTCTTGTGGACCTGGGGC
|
|
| DNA Sequence for Gene |
>G559_RS0112410
TTGGCAAGCGTGATTGATCCGGTTCGGGCGGATGATTTGCTGACAGCTTATCGACTCGCTCTGAGACACGACGCACAGTATTCCGCTGCCCTCGCTCAGC GGCGCGCAGGAGATGAAGGGCTGAACCAGGGGCGAGCAGGACTGTTGCCGCAGATTTCGTTCGACGCTCAGACGAGTTGGAGCGAAACCGAGTACGAAGT CGTCAATGGGGCGATAAAGAAGCGCCGCCAGAACCGCAGCTATGGCGTTCAACTAGTGCAGCCGCTGTTTCGCTGGCAAAGTTGGATTCAGTACCAACAG GGCGGACTACAAAAACTACTTGCCGAGCTTCAAGCGAAGAGTGCTGGCCAAGCGTTGATGTTGCGTGTGGCTGAAGCGTATTTCAATGTTCTGAACGCGG CCGATGTGATTGACGCACTGGAACAGTTGCAGGCGGCAGACGAGCTACAACTAGCCAGCGCACGCAAGAATTTCGACCTGGGCAATGCCAGCATCGTCGA CGTGCACGAGGCTCAAATGAGCCACGATAGAATTACGGCGCAGTTGGTGAAAGCCCGAAGTGATCTAGTGCTGGCCCGTCATGCGCTGGCTCGGCTCACG GGCAGGCGCCCAGGGGCGCTTAAACGCTTGGGGAACCAAGTGATGCTGAGCCCACCGGAACCGGTTGATGTGGAAGCATGGGTCATGAATGCGGAGCGGG ACAGTCTTGAGGTACAGACTCAGGAGTTGGTGCTGCAGATTGCTGGCAACGAGGTTCGCAGTCGCAAGGCGGAACACTTGCCGACACTCGATATGGTAGT CAGCCAGAACATGCAGCAAAGTCCCAATGTCAGCACAGAGCGCAGCGAGTCCGCGGCCATTGGAGTACGGTTGAGTATGCCGCTATTCAGCGGTGGTCGG ACTACCTCGTCTGCGCGCGAGGCTGTGGCACTGCACCAGCAGGCCGAATATGAACTGGAGGATACACGGCGTGGTGCGGCTCTGGCCGCACGCGAGGCGT GGTCTGGTGTTATGGATGGGATTGCCCAGGTCAAGGCATTGGAGGTGGCACGGGTTTCTGCGGATACAGCAGTGAGATCGAATCGACGAGGCTATCAAGT TGGGGTGCGCACGGGCGCGGACGTGCTTGAGGTACAAGGCCAGTTAAGTGACTTCGTGCAGCAGCTTGCCAAGGCTCGATACGATGTATTATTTGCGCAA TTGCGGCTCAAGGCGGCTATTGGTGCTTTGTCACCAGTGGATCTTGACAAGATCAATGTGTTGCTTGAATAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACATAGACGTGCTTTTAGCGAGCAGGCGGTCGGAGCACTCGGCGAAGTATTTGGAGGCCAGGTCGGCGAGAAAGGGCGCCTCCGGGTGTTTCAGAGTGAA ACGCACGCGGTGGTCGTCGAGCTTCTCGATGCGCTCGATCAACTGCGCGAAGGCCATGGATTCGGCATAGGGGAAGCCGCGCGGGGACAGCGTGTGCCAG GGATGAGCCGGGTCGAGCTGGCGCTGGAAACTCCAGAGCACGTCGTCGGCGTTGAGTTCACGGCTGGGAGTGAACCAGGACGTGCTGTGGAAGGTAACGC CCTTGCGTAGCTGGAACTCGTAGACGAGGCCGTCAGGGCTGATGCTCCAGCTTTCCGCCAATCCCGGTTGCAGCCGGGTGCTGCCGGGCGCGAACTGCAC CAGGCGGTCGAAGACCGTCTCGGCCGAGGCATCGGCCGTGGTGGCGGCGGTGTACTGGACAATGTCGAAGCCTTCGGGGCTGGCTTCGGTGCAGACGACT
|
|
| Amino Acid Sequence |
>hypothetical protein
MASVIDPVRADDLLTAYRLALRHDAQYSAALAQRRAGDEGLNQGRAGLLPQISFDAQTSWSETEYEVVNGAIKKRRQNRSYGVQLVQPLFRWQSWIQYQQ GGLQKLLAELQAKSAGQALMLRVAEAYFNVLNAADVIDALEQLQAADELQLASARKNFDLGNASIVDVHEAQMSHDRITAQLVKARSDLVLARHALARLT GRRPGALKRLGNQVMLSPPEPVDVEAWVMNAERDSLEVQTQELVLQIAGNEVRSRKAEHLPTLDMVVSQNMQQSPNVSTERSESAAIGVRLSMPLFSGGR TTSSAREAVALHQQAEYELEDTRRGAALAAREAWSGVMDGIAQVKALEVARVSADTAVRSNRRGYQVGVRTGADVLEVQGQLSDFVQQLAKARYDVLFAQ LRLKAAIGALSPVDLDKINVLLE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|