Pseudomonas sp. CFT9, CFT9_22003
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF141868 | EAL domain-like | IPR035919 | EAL domain superfamily | 288 | 534 | 1.31E-87 |
| FunFam | G3DSA:3.20.20.450:FF:000001 | Cyclic di-GMP phosphodiesterase yahA | - | - | 284 | 539 | 2.3E-89 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 104 | 273 | 1.3E-36 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 116 | 265 | 8.9E-31 |
| Gene3D | G3DSA:3.20.20.450 | EAL domain | IPR035919 | EAL domain superfamily | 285 | 539 | 2.7E-99 |
| Coils | Coil | Coil | - | - | 277 | 297 | - |
| SMART | SM00052 | duf2_2 | IPR001633 | EAL domain | 283 | 529 | 1.3E-112 |
| PANTHER | PTHR33121 | CYCLIC DI-GMP PHOSPHODIESTERASE PDEF | - | - | 81 | 535 | 0.0 |
| Pfam | PF00563 | EAL domain | IPR001633 | EAL domain | 289 | 524 | 3.6E-76 |
| CDD | cd01948 | EAL | IPR001633 | EAL domain | 289 | 529 | 5.6404E-113 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 110 | 284 | 5.9E-42 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 118 | 265 | 1.76165E-40 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 111 | 265 | 1.3E-22 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 120 | 275 | 5.89E-35 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.