Pseudomonas sp. CFT9, CFT9_17926 (flhA)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00949	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0009306	protein secretion	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00949	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0044780	bacterial-type flagellum assembly	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01398	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	33	46	3.4E-55
PIRSF	PIRSF005419	FlhA	IPR001712	Type III secretion system FHIPEP	2	703	0.0
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	237	251	3.4E-55
NCBIfam	TIGR01398	JCVI: flagellar biosynthesis protein FlhA	IPR006301	Flagellar biosynthesis protein FlhA	16	700	0.0
Pfam	PF00771	FHIPEP family	IPR001712	Type III secretion system FHIPEP	26	692	0.0
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	186	203	3.4E-55
Gene3D	G3DSA:1.10.8.540	FHIPEP family, domain 3	IPR042193	FHIPEP, domain 3	509	596	5.8E-24
Gene3D	G3DSA:3.40.50.12790	FHIPEP family, domain 4	IPR042196	FHIPEP, domain 4	600	700	1.5E-24
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	156	174	3.4E-55
Gene3D	G3DSA:3.40.30.60	FHIPEP family, domain 1	IPR042194	FHIPEP, domain 1	365	508	3.8E-51
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	70	89	3.4E-55
PANTHER	PTHR30161	FLAGELLAR EXPORT PROTEIN, MEMBRANE FLHA SUBUNIT-RELATED	IPR001712	Type III secretion system FHIPEP	12	701	0.0
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	137	153	3.4E-55

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.