Pseudomonas sp. CFII64, CFII64_11986

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig26, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTGCTCAGCCGATGCATGGTAAAGACGTATTGGGCCATTGAATAAAAACCTGGTGTATGTGGCTATTAAATAGGGCTGAATAGAGCGCGAGCTTAGAGCC CTGTCCTGAAAAAAGCTTTTTCTTATCGACGGCACTTGCCGTTTGACGTTTCCGAGCCTTGAATCAAGCACAGCGACTAGGCGATGAACGATAGGATTGG GATCGGGATCATTAAATGCAAGCAGTGGAATCACTCATGCAGAAATCAGGGCCGCGCGTCGGGCAAAGCTACCCGAATGCGCCCGGCAGGGCAAACCATC CGGCCTAACGGGACTGGCACTTTGCCACAACTAAAGGCATGCTAGCCGCCCTTTGGGCGTCCGGCTTATAGTGCATTTCGCATTAGTTGCCTCACTGATC GTGTGAAAACGTTGTTGCAGGAGTTTTCACGCTGTCTGTTCAGTCCAGTAGTCGTCAGGATCAGAGCTTGCCCACACCAATTCACCCCTATTCAACGCGT
DNA Sequence for Gene
>CFII64_11986
ATGGCAAAAGGCGCGAACGTCACGCCCTTGCGCGGCTCACTGAAAGGTGCGCTCGCAGCTTTGGTGTTGCTGATGCTGGCGTTGTTGTTGTGGCAGTTGA TCGAGCAGTTCCAGCAGACTCAGGATCGCCAGCGTCAGCGCAGTCTCGACTACAGCGTGCAGTTGGCTGATCGCCTGAGCCTGAACATGGCCCTCAGCGC GCAAGTCAGCCTCAACCTGCTGGCCGACAGTTCGCAACAATCACCTGACTCGACCGGATCGACCCAGCTTGCGGCGCTGCGTCAATCCCTGCCTTCGCTG CGCAGTATTGCCTTGCTTGACGCTACCGGCAGTGTCGTTGCCGATAGCGTGGACAACCCCCGGGACGCCGACGTTCTGAAAAAGGCCATGCAACAGGCAG CGGGCCGACCTTATTACTACGACAACGCGACCGATGGCTCAGTCATCTACCTGTTGGTGCGCAAGCCCGGCGACGTTCGCGAATACTGGGCCTTGCGGAT GGCCCCGGAGGCCTTGAAAGCCCTGGCCCGACAGACTGCTCAGGATTTCCAGCCCATGTGGCGCCTGGAAAACCGCACCACCGAACGCATGCTGTTTCGT GATAGTCCACCAGCTAGCGAGCCCAGCGGCAGCAGTCTGGGGGAAAACGAAACCGTGTTGCTCCAGCCGTTGACCAACAGCGATTGGCAACTGCGCGGCC TGTTTGACGCGCAGAAGGCGCGGGAGCAACTGCTGCCGCCGTTGATCGGCAAGTGCCTGATCGGCCTTTTGTGTTCGATCCTGCCCCTGCTGGCATTAAT CAGCCTGCGTCGCCGCCAGCGTCAATTGCACGAAAGTCGTCGCCGTTATCAAGAGATTTTCGAAGGTGCCGGCGTTGCCATCTGCGTCCTGGACATGTCA GGCCTGCCGGACCACCTGGATGCCTTGAAACTCAATACCCGCGACGATCTCGAAGGTTTGCTGCAGGTTCAGCCTGGCCAATTGAAGGCGCTGTTGCGGC AACTGCGCATTACCGAGGTCAATCAGGTCGCGCTGAGCCTGCTCAAGGTTGAATCCAGCCAGCAGGCCTGGGAATACCTGATCGAGGGCTGCCCGCGCAC GCGTCAGGGCATTGGCGAACAGGTGCTGCATGCGGTGTTGTCCAGGCAAAACCAGCTCGAACTGGAAATCCGCCTGACTCAGGATGACGGCGAAGACCAG CATTTATGGCTGGTGCTGCGCCTGCCAGAGCATATCGACGACTTCCATTCGGTGATTCTCAGCATCGGTGACATTACCCGGCGCAAACAGGTCGAATTGT CATTGCAGGAACGCGAGAGCTTCTGGTCCGATGTGGTGCGCACTGTGCCGGATCATCTCTATGTTCAGGACGTGCTCAGCCAGCGGATGATCTACAGCAA CCACCATCTGGGGCACACGCTGGGTTACAGCAAGACCGAGTTGTTGCGGATGGGCGAGTTTTTCTGGGAAATCCTGCTGCATCCCGATGACGCGCAGAGT TATCAGGACATGCGCCTGCGCCAGCGTCATCGCGGCCACAGCGAGCTTCTGCATTGCCTGCTGCGGTTTCGTGACAGCAACAGCAAGTGGCGGCGCTTTG ACATCCGCGAACAGGCGCTGGCCCGCGACAAGGACGATCAGGTCACCCGCATCATCGGTGTCGCCAAGGACGTGACCGAACAGCTGGAAGCCAGCGAATC CTTGCGCGACAGCGAACAGCGCTATCGCATGCTCGCCGAAAGCATCAGCGACGTGATTTTCTCCACCGACAGCCAGCTCAAACCCAACTACGTCAGCCCG TCGGTGAATACCGTGCTGGGCTATAGCGCCGAGTGGATTCTCGAGAACGGCTGGGACAAGACCTTTGCCAACCCGGCACAACTGGCGGACATGTATGCGC TGCTGGCGCGTGTCAGCAAGGCCCTGGATCAGCCCGAGGAATTGCAGAAGCTGCGCCTGGAAGTGCCCACCCAGCTATTTCTGTTCGACTCCCTGCGGGC CGATGGCCGAAAGATCCCCATCGAACTGCGTCTGGTGCTGGTCTGGGACGACCGCGGCGTCTTCGAAGGCATCCTCGGCGTCGGGCGCGATGTCAGCCAA CAGCGGCGGGCGGAAAAAGACCTGCGCATGGCCGCCACGGTTTTCGAACATTCCACATCCGCCATCATCATTACCGACCCGGCAGGCTATATCGTCCAGG CCAACGAAGCCTTCAGTCGAGTCAGCGGCTACGAAGTCGCGCAAGTACTGGATCAGCTGCCGACCATGCTTACGGTGGACGAACAACAGGAAGCGCACCT GCGCTACATCGTCAAGCAACTGCATCAGCGACGCAGCTGGGAAGGTGAAGTTTGGCTCAAGCGTCGCAGCGGCGAGCATTATCCGGCATGGGTTGGCATT AATGCAGTGCTCGACGATGAAGGCGATCTGGCCAGTTACGTGTGTTTCTTCAGCGACATCAGCGAGCGCAAGGCCAGCGAGCAACGCATCCATCGCCTGG CTTATTACGACGCCCTGACCCACCTGCCCAACCGCACGCTGTTTCAGGATCGTCTGCATTCGGCCTTGCAACAGGCTGAGCGACAGCAGTCATGGGTCGT GCTGATGTTCCTCGATCTTGACCGCTTCAAACCGATCAACGACTCACTCGGCCATGCTGCCGGCGACCGCATGCTCCAGGAAATGGCCACACGCCTGCTG GCCTGCGTTGCCGATGACGACACCGTGGCGCGCATGGGTGGCGACGAATTCACCTTGCTGTTGCAACCGGGCGCCACTCGCCAACTGGCCTTGAACCGCG CTATCAACGTCGCGGAAAAGATCCTGACCAGCCTGGTCACGCCGTTCGTGCTCGAAGGCCGCGAGTTCTTCGTTACCGCGAGCATCGGCATCGCGCTCAG TCCGCAGGACGGCAATGAGCTGAGCCAGTTGATGAAGAACGCCGACACGGCGATGTATCACGCCAAAGAGCGCGGCAAAAACAACTTCCAGTTCTACCAG GCCGACATGAACGCCTCGGCGCTGGAACGCCTGGAGCTGGAAAGCGACCTGCGCCACGCGCTGGAACAGAAAGAATTCACCCTCTACTACCAACCGCAGT TCAGCGGTGACGGCAAACGCCTGACCGGCGCCGAAGCCCTGCTGCGCTGGCGCCATCCGCGCCGTGGCCTGGTATCGCCCAATGAATTCATTCCCGTGCT CGAAGAGCTCGGGCTGGTGGTGGAGGTCGGGGATTGGGTCTTGGCCGAGGCCTGTCGCCAGCTCAAGGCGTGGCATGTGGCTAAGGTGCGCGTGCCCAAA GTCTCGGTGAACATCTCGGCACGGCAGTTCTCGGACGGCCAGCTCGGCACCCGGATCGCCAACATTCTCAAGGAATCGGGCCTGCCACCGGCTTGCCTGG AGCTGGAACTGACTGAAAGTATCCTGATGCGTGAAGTCAGCGAAGCCATGCAGATTCTCGACGGCCTCAAATGCCTGGGCCTGAGCATCGCGGTCGATGA CTTCGGCACGGGTTATTCGTCGCTGAACTACCTCAAGCAATTCCCCATCGACGTGCTGAAAATCGACCGCACCTTCGTCGACGGCCTGCCATCAGGCGAG CAGGACGCCCAGATTGCCCGGGCCATCATTGCCATGGCGCACAGCCTCAATCTGGCGGTCATCGCCGAAGGCGTCGAAACCCACGAGCAGCTGGAATTCC TGCGCGAGCATGGCTGCGATGAAGTCCAGGGCTACCTGTTCGGCCGCCCAATGCCGCCAGGACGCTTCGAAGCGCAGTTCAGCAACGATGCGCTGTTCAT GATTGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTTCCAAATCTGTTGGAGCGAGGCTTGCCCGCGAATGGGCCCATTTGGCGACATCGTCGTTGCTGACCGCACGGATTCGCGGGCAAGCCTCGCTCCAACG GGGGTATAACCCGCGCTGCGTGAATACCGCTTGTTCACGACATGACTTCCTTTCATATGCCAGATAAAAGCGGTTGGGGTAGAATGCCCTCCTTTTCTGC CCCGATCCTTGAGGACCGCCATGTTCAGCCGTGATTTGACTCTCGCCAAGTACGACTCCGATCTCTTTGCCGCAATGGAGCAAGAAGCTCAGCGCCAGGA AGAGCACATCGAGCTGATTGCCTCGGAAAACTACACCAGCCCAGCGGTCATGGAAGCTCAGGGCTCGGTCCTGACCAACAAGTACGCCGAAGGCTATCCA GGCAAGCGCTACTACGGCGGCTGCGAATTCGTCGACGTGGTTGAGCAACTGGCCATCGACCGCGCCAAGGAACTGTTCGGCGCCGATTACGCCAACGTTC
Amino Acid Sequence
>sensory box/GGDEF domain/EAL domain protein
MAKGANVTPLRGSLKGALAALVLLMLALLLWQLIEQFQQTQDRQRQRSLDYSVQLADRLSLNMALSAQVSLNLLADSSQQSPDSTGSTQLAALRQSLPSL RSIALLDATGSVVADSVDNPRDADVLKKAMQQAAGRPYYYDNATDGSVIYLLVRKPGDVREYWALRMAPEALKALARQTAQDFQPMWRLENRTTERMLFR DSPPASEPSGSSLGENETVLLQPLTNSDWQLRGLFDAQKAREQLLPPLIGKCLIGLLCSILPLLALISLRRRQRQLHESRRRYQEIFEGAGVAICVLDMS GLPDHLDALKLNTRDDLEGLLQVQPGQLKALLRQLRITEVNQVALSLLKVESSQQAWEYLIEGCPRTRQGIGEQVLHAVLSRQNQLELEIRLTQDDGEDQ HLWLVLRLPEHIDDFHSVILSIGDITRRKQVELSLQERESFWSDVVRTVPDHLYVQDVLSQRMIYSNHHLGHTLGYSKTELLRMGEFFWEILLHPDDAQS YQDMRLRQRHRGHSELLHCLLRFRDSNSKWRRFDIREQALARDKDDQVTRIIGVAKDVTEQLEASESLRDSEQRYRMLAESISDVIFSTDSQLKPNYVSP SVNTVLGYSAEWILENGWDKTFANPAQLADMYALLARVSKALDQPEELQKLRLEVPTQLFLFDSLRADGRKIPIELRLVLVWDDRGVFEGILGVGRDVSQ QRRAEKDLRMAATVFEHSTSAIIITDPAGYIVQANEAFSRVSGYEVAQVLDQLPTMLTVDEQQEAHLRYIVKQLHQRRSWEGEVWLKRRSGEHYPAWVGI NAVLDDEGDLASYVCFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHSALQQAERQQSWVVLMFLDLDRFKPINDSLGHAAGDRMLQEMATRLL ACVADDDTVARMGGDEFTLLLQPGATRQLALNRAINVAEKILTSLVTPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQ ADMNASALERLELESDLRHALEQKEFTLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVSPNEFIPVLEELGLVVEVGDWVLAEACRQLKAWHVAKVRVPK VSVNISARQFSDGQLGTRIANILKESGLPPACLELELTESILMREVSEAMQILDGLKCLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPSGE QDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRPMPPGRFEAQFSNDALFMID
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site