Pseudomonas sp. CFII64, CFII64_08182

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGGCGCCATCGTCAATGTGTCATCCATCGCCACGCGCAGCGTCAATCGGGTTCCCTACGGCGCGGCGAAGGGCGGCGTCAACGCGCTGACCGCGTGCCT GGCCCTGGAAACTGCCGGCAGCGGCGTGCGGGTCAACGCCACCGCGCCCGGCGGCACCGAAGCACCGCCAAGACGCATCCCGCGTAACGACCAGCCGCAG AGCGAACAGGAAAGTGTCTGGTACCAGCAAATCGTCGATCAGACGCTCAACAGCAGCTTGATGAAACGCTACGGCACCATCGATGAACAAGCCGCAGCCA TTCTGTTTCTGGCTTCCGACGAGGCTTCGTACATCACCGGGGTAACCCTTCCAGTGGGCGGCGGGGATCTGGGCTGATATCGGGACGACGGTATTTGTCT GTGCTGGAAAAACCGGCTATCTGGCAAGGCTCAACGATAAACGAAGTCGGCCGATACGCTGTTATCGACTCTTCGTTTTACGTCATGCGCCTGGAGTTAC
DNA Sequence for Gene
>CFII64_08182
ATGCCCAAATCCGCCCCGCAACCTGTTGCCCATCCGCTGCAGAACCGCTCCAGCGTAGCGCTGGCGCGGGCTTCGTTGTTCAAATTTGCCGGGCTGCTGG CGGCGGTGATCTTGCTGGCCAGCGGTCTGCTCGTTTACGTGGCGCACAATCTCGACACCATTGAAGAAGCAGAAAGTGCCTTCTACACCCGCAAGGCTGT GCAATCACTGGAAAAGTCCTTGCTCTTGACCGTCAAGGACTACGCTTTCTGGGGTGACGCCTACAAGCATTTGCACACCCGGGTTGATACCGACTGGGCG TTCGTGCGGCAAAACGTGGGTCCGACCCTTTATGAGGACTTCGGCTTTCAGGGATTGTTCGTGGTCGATGCCGCCAATCGAACCGCTTACTCAGTCATCA ATGGCGTTATGCAGACCATGGATATCGCGCAGTGGCTGGCGCAACCCATTGACGCGATTCTCGATCGCGCTCGTGCCGGCGCGGAGAATGAAACCCCGCT TACGACCTTCATCAATGTGGGCGGGGTGCCTGCTCTGGTAGCGGCCGCCGCGATTACGCCGGGTACGGATCCGACCGTGGTGTCGGACGATGGACTGCCA TCGGTGCTGATTTTCGTGGAAATGCTCGACAGCAGCAGGCTTGCAGCGATCGGCAACGACTATGGGGTTGACGGGCTGCACATCTCAACCTCTGACGAAA CCCATGAGACTTCAATTTTACCCTTGGGTGAGAAGGGTTCGGCAGGTGCATTACATTGGCAACCACCCAAACCTGGCCAGCAACTGCTGGGGCTTGTGCT GCCCGTGATCGGTATCGCCGCGTTGCTGGTCTGGCTGATGACGTGGGCGATTTTGCGGCGTACGACCGTTGCCGCACGAGCCCTGGATGCAAGCTTTGCC TCGCTGCAAGCCAGTCAACAGGCGCTGGCCACCAGCGAAGCGCGCTTTCGTGATGTGGTCGAAGCCAGTTCTGACTGGATATGGGAAATCGATGCTGACT GGCGCTTCACTTACCTGTCCGAACGTTTTGAAATCGTCACCGGCCTGTCCAGGCAGGACTGGATTGGCGCAGCCATTGACGATTTGCTGCACACCGAACT TGGCGCTTTATCGCAGTGCCTGAGCATTCCCAATCGCAGGCCCTGCATCAGCCTCCAGTGCAATTACCTGGATATCAGGGGGCATGCAAGAATCACTCGT TTGTCTGCTCGTGAACTGCCCGGTAATGGTTTTCGTGGCACTGCAACGGATGTCACAGAGGAAGTCGAAGCCCGGCGGCGCATCGAGTTCCTGTCTCAAC ATGATGCACTGACCGGGTTGCCGAACAGGATACGGCTACAGGAGTTTCTGGACGGAAAACTCAAGGCAATGCCAACCCAGGAGCAACCGCTGGTGATGCT CAGTCTGGACCTTGACCGATTCAAACCGGTCAACGACCTGCTTGGCCACGCCGCCGGTGATCGGGTGCTCAACGAGGTTTCGCGGCGTCTGGCAGAGTGC CTTCGCGGTGGCGATCTGGTTGCGCGGATCGGCGGTGACGAGTTCGTGCTGATCCTCACCGATATCAGTTCCCAGGAAGGCGTCGAAGCCTTGTGCCGAC GGTTGATCGACTCCATCGAACAGCCTATAGACATCGATGAACAGGATATTTTCATCAGCGCCAGCATTGGCATCGCCATGGCCCCCAACGATGCGTCCCT GGCAGCCGAACTGCTGCGCTACGCGGATATGGCCTTGTACGAGGCGAAGGCCGGTGGCCGCAACACCTGGCGCTTTTTTGCCGATGACATGAATGCCCGG ATTATCGAGCGTCGGCGGCTGGAAAACGATCTGCGCTATGCCATCAGAAACGGCGAACTTCGCCTGCACTTCCAGCCGCGCTACCGCATTGCCGATGGCC GGATGGTGGGGGCCGAGGCGCTGGTGCGCTGGCAGCACCCGCAGCGCGGTCTGATACCGCCAGACACATTTATCCCTATCGCCGAGGAAACCGGGCTGAT TCTGCCGTTGAGCAACTGGGTGCTGACTACCGCTTGCCAGTCCGCAGCCGACTGGCCCGAAGAACTATTCGTATCAGTAAACCTGTCGCCGACAGAGTTT CAGCGCGGCAATCTGGTCGAGCGGATTCAGCAAACGCTGGCCGACACCGGGATCGATCCGTCCCGGGTCGAACTGGAAGTCACCGAAAGCGTCATGCTCG ACGACGCCCCGGGTGCGCTGGAGGTCATGCATGCCCTTAAACGGCTTGGCGTGCGGCTGTCCATGGACGATTTCGGCACGGGATATTCCTCGCTGAGCTA TCTGCGCTCGTTCCCGTTCGATGGCCTCAAGATCGACCGCAGCTTCCTCAATCGCCTGGGCGCCAGCGCAGATGACCAGTCCATTATCCGGGCCATCGTC GGCCTGGGGCGTGCATTGTCCCTGACGGTAACGGCCGAAGGCATTGAAACAGCCGAGCATCTTGAACTGCTCAAAGCCGTTTGCTGCGATGAAGGTCAGG GTTATTTCCTGAACCGGCCGATGGATGCTCAATCTTTCGATGCGCTGCTGGGAACAATGGAAATTGCGGGCACATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCGAGGGTTAACTCAGGAGGAAATCCAGAACCGCGGCGGTAAAGGCTTGATCCGCTTCCACGTTCGACAGGTGTGCCGCATTTAATACCACCCCTTTAG TGCCTTTGATTGCGTTCACCAGAAAATCTCCATCCGCCACGGTAGTCACCGGGTCCTGGTCGCCGCTGATCACCAACACCGGCAAGCGTACCGTCGCGAA CTGCTCGCGAAAATCTGCGTCACGTACCGCTGCGCAGTTGGCGGCGTAACCCGTCGGCGAAGTGTTGGCGAGCATCTCGACCAGGCGGTTTACTTGCTCA GGCCGGGTTTCGGCGAAGCGCGGTGTGAACCAGCGGGAAAGGGTCGCGTCACGCAGGGCGTGCATGGCTGCGGGGCCATCGCGAAGGACTGCTTCAATGC GTGGATTCCATACTTCGGGGCTGGCGATTTTCGCAGCGGTGTTGCACAGCACCACCCGTTTGAGCCGCTGCGGCGCATTGAGCATCAGCCATTGCCCGAT
Amino Acid Sequence
>putative signaling-like protein
MPKSAPQPVAHPLQNRSSVALARASLFKFAGLLAAVILLASGLLVYVAHNLDTIEEAESAFYTRKAVQSLEKSLLLTVKDYAFWGDAYKHLHTRVDTDWA FVRQNVGPTLYEDFGFQGLFVVDAANRTAYSVINGVMQTMDIAQWLAQPIDAILDRARAGAENETPLTTFINVGGVPALVAAAAITPGTDPTVVSDDGLP SVLIFVEMLDSSRLAAIGNDYGVDGLHISTSDETHETSILPLGEKGSAGALHWQPPKPGQQLLGLVLPVIGIAALLVWLMTWAILRRTTVAARALDASFA SLQASQQALATSEARFRDVVEASSDWIWEIDADWRFTYLSERFEIVTGLSRQDWIGAAIDDLLHTELGALSQCLSIPNRRPCISLQCNYLDIRGHARITR LSARELPGNGFRGTATDVTEEVEARRRIEFLSQHDALTGLPNRIRLQEFLDGKLKAMPTQEQPLVMLSLDLDRFKPVNDLLGHAAGDRVLNEVSRRLAEC LRGGDLVARIGGDEFVLILTDISSQEGVEALCRRLIDSIEQPIDIDEQDIFISASIGIAMAPNDASLAAELLRYADMALYEAKAGGRNTWRFFADDMNAR IIERRRLENDLRYAIRNGELRLHFQPRYRIADGRMVGAEALVRWQHPQRGLIPPDTFIPIAEETGLILPLSNWVLTTACQSAADWPEELFVSVNLSPTEF QRGNLVERIQQTLADTGIDPSRVELEVTESVMLDDAPGALEVMHALKRLGVRLSMDDFGTGYSSLSYLRSFPFDGLKIDRSFLNRLGASADDQSIIRAIV GLGRALSLTVTAEGIETAEHLELLKAVCCDEGQGYFLNRPMDAQSFDALLGTMEIAGT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site