Pseudomonas sp. CFII64, CFII64_04970

Gene Feature Overview

Strain	Pseudomonas sp. CFII64 GCF_000416235.1|latest
Locus Tag	CFII64_04970
Name
Replicon	contig_9
Genomic location	76605 - 77291 (+ strand)

Cross-References

RefSeq	WP_020289657.1
GI	520785517
INSDC	EPJ88496.1
NCBI Locus Tag	CFII64_04970
UniParc	UPI0003580011
UniProtKB Acc	S6HLR6
UniProtKB ID	S6HLR6_9PSED
UniRef100	UniRef100_S6HLR6
UniRef50	UniRef50_Q88QI8
UniRef90	UniRef90_S6HLR6

Product

Feature Type	CDS
Coding Frame	1
Product Name	outer membrane protein W
Synonyms
Evidence for Translation
Charge (pH 7)	-5.05
Kyte-Doolittle Hydrophobicity Value	0.049
Molecular Weight (kDa)	24.3
Isoelectric Point (pI)	4.99

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Drugs Targeting this Protein

Identified by Diamond using e-value cutoff of 0.0001 and returning alignments that span 100% of the query sequence and that have more than 95% identity.

Drug Name	Source Accession	Source DB	Version	Target Accession	Target Description	Percent Identity	Alignment Length	E-Value
(Hydroxyethyloxy)Tri(Ethyloxy)Octane	DB04233	DrugBank	5.1.4	P0A915	Outer membrane protein W	45.6	228	4.6e-42
Lauryl Dimethylamine-N-Oxide	DB04147	DrugBank	5.1.4	P0A915	Outer membrane protein W	45.6	228	4.6e-42

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001618 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: CFII64_04970 Search term: outer membrane protein W

Human Homologs

References