Pseudomonas sp. CF149, CF149_17805
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd01948 | EAL | IPR001633 | EAL domain | 398 | 639 | 1.94967E-113 |
| Gene3D | G3DSA:3.20.20.450 | EAL domain | IPR035919 | EAL domain superfamily | 393 | 654 | 1.3E-98 |
| SUPERFAMILY | SSF141868 | EAL domain-like | IPR035919 | EAL domain superfamily | 398 | 646 | 5.75E-88 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 210 | 385 | 1.2E-55 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 216 | 382 | 4.6E-45 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 226 | 384 | 2.35E-48 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 210 | 382 | 1.1E-61 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 221 | 378 | 3.5E-48 |
| SMART | SM00052 | duf2_2 | IPR001633 | EAL domain | 392 | 639 | 2.7E-111 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 222 | 377 | 6.90745E-62 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 217 | 380 | 3.2E-45 |
| PANTHER | PTHR33121 | CYCLIC DI-GMP PHOSPHODIESTERASE PDEF | - | - | 178 | 646 | 0.0 |
| FunFam | G3DSA:3.20.20.450:FF:000001 | Cyclic di-GMP phosphodiesterase yahA | - | - | 393 | 649 | 5.3E-92 |
| Pfam | PF00563 | EAL domain | IPR001633 | EAL domain | 398 | 634 | 5.8E-76 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.