Pseudomonas syringae BRIP39023, A988_16493

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGACACTTGGAAAATATTAAACTTTCGGAAAATTCTTACAAACAAACGAAGAAAATATGTAGGAAAGCATATAATTTATGTACCAAAATATTTAACAACC TAACTACCTATTGACCAAATACGCTGTTGCGTGCCCATCAGAATCCACAGATGTATTTTGCTTAAAACTTAACCACGAGAGGCCACTAAACGGCCAGCCA TCTTGCCAACAGCACTGAAAAAACCCATGACCTCCCATACAACAAGGCCAAATATAAAATATGGATATTTTTGGATAGAGTCCTGGAAAGCTGCGCAAAA AAATGAAAATAGCGCGCAAAAACTTGCACAAATTACTCGAAAAAACTCACAACGAGCAGCACCCTCATATCCGTTCAAACGGCCAAACCAGCTGACAATA CTGACTTAAGAGATACCTGGCACGTAACTTGTTATAGCGATGCTTCGACCTCCAAGCCGATTTGCTTGTGAGGCGCCACCGACTGTAAGGAAGGACGTTA
DNA Sequence for Gene
>A988_16493
ATGCCTACACCCGCCTATATGACTGTCATAGACGCCAATCAGAAAATACTGACAGCAGGAGCTTTCACAACAGACTCTGTCGGCAACGTCTATCAGGAAG GCCATGAAGATGAAGCAATAATCCAGGCATTCAGCCATAACATTATTACACCCTGTGATCCTCAGTCAGGGCAGCCTACTGGCCAACGCATTCATGGTCC TGCGTGTGTCACGAAAATTTTCGACAAGACCTCGCCATTGCTTCTGGAGGCTCTTTGCTCAGGCTCAACACTAAGCAAAGTCGAAATCAAGTGGTACCGG ACGTCTATCGATGGCAAGCAGGAACACTATTACACCACCACCCTTGAGGATGCGGTCATCGTCAACATCAGGTCCTACATGCACAACTGCCAGGATCCGA AGAACTCGCACTTTGGACACCTGGAGGACGTTCAATTCAGCTATCGCAAAATAACCTGGGACCACGTAAAGGCCACTACTACCGGGTCTGATGACTGGAG AAGTCCTAAGTCGGCATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTACGCGGCCCCGGCGGTTCGACAGGATCGTCGGGGTTTTCATAAACCGGCTAGGCACGGTGGTCCATATGACGCTTAACCCCACTGATCGACCTTATTT CAGCCTGATCATCGACGGCCCTGAGCATGATTTTCAAATCCTTTCATTTACCGGCCATGAAGCTATCAATCAGCCCTTCTGTTTCAAGCTTGAGCTGGTC AGCGAGCGCGCATCGCTGAATCTCGAAAGCCTGCTGAATTGCCCCGCATTTCTGCAGTACACATCAAGGGGCAACGGCATTCATGGAGTGATCGATCAGG TTTCCCAAGGCGATTCCGGCAGGCGTCTTACGCACTACTCAGTCACCTTGCGACCGAATCTGGCAAGGCTCAAGCATCGTACCAATCAGCGTATTTTTCA GAATCGAACTGTAAAGGAGATTATTGAGCAGGTATTGAAAGAACATCACCTGATGGGCGATGCCTACAGCTTCCAGCTCGGTACGACTTACCCGGAGCGC
Amino Acid Sequence
>secreted protein
MPTPAYMTVIDANQKILTAGAFTTDSVGNVYQEGHEDEAIIQAFSHNIITPCDPQSGQPTGQRIHGPACVTKIFDKTSPLLLEALCSGSTLSKVEIKWYR TSIDGKQEHYYTTTLEDAVIVNIRSYMHNCQDPKNSHFGHLEDVQFSYRKITWDHVKATTTGSDDWRSPKSA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site