Pseudomonas syringae BRIP39023, A988_07824

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCAGTGCAACGCGATTGAAGCCACCGTTCAAGTGGGCGGAGAGCCTGTCGTCGTCTCCATTCAGCGTCGCGATGTGCCTGAAGAGGCAACGCTTGCCGAA GCGTTCGCCGAAGCCGTCAAGGCGCTGCAGCCACTGCATGGCGAAGTCCAGGTCATTCGCCACTACGAAACGCTGTTGGCGGGCAATGCAGCGCTGGCGC TGGATTTTCATTTTCGCGCAGGCCTTGAAGAGCGGCATGGACGCCTGATCGGTGCCATCGTGCCGTGTGCCGATCACAACGAACGCCAATGGCTGAGCGT GGGCTGCGTGATTGACTCCGAAAAGACCGCGCTGAAAACCTGGTTGCTGGATTTTGACAGCATGCTTGAAGGCCTGACCGCCCCCTGAACTCTATTTCAT CGCTGACAGGACACGCTTTAATGGACTATCCGTTGCAGAATATCAGCGTCACGCCAGGTGATCGCACCTCAACTAGTCGCAGCCCGCAGGAGTAACGGCG
DNA Sequence for Gene
>A988_07824
ATGTTCGAGGCAGCGCGGTTACTGGATGAGATCGAACACACCGGTGCAATGGCGGGCTTTGTGCTCGGAGCGATCGTGGGCATCGCGGCAGTGGCGTATG TCTCGCTCACCGTCGCCACGTGCGGGTTCGGCGGTTTTTTACTGGCCATGGCAGTCGGCCTGGCCGGTAATGCTATCGCCAGTATCGGGGAGAGTATCGG CAGCGCCTTCAGCTCTCCCGCGGGGCAGATCGAATCTGCCTCGCCCAACGTGTTCATCAATGGCCGCCCCGCTGCCTTTGCCATCGAAAGCACCGCCGTG TGTGACAAGCACTCGCCGATCGTCAAGGTGGCCGAAGGCTCCAGCAACGTCTTCATCAACGGCCAGCCCGCTGCGCGCAAGGGCGACAAGCTGACCTGCG GCGCGAAGATCGGCACCGGCTCGCCCAACGTCTTCATCGGCGGCGGTACCCAACGCTACCTGCCGGTGGACGACGAAGTCTCGGCGATGGCCCGCTACAC CGTGGACATTCTGTTGGTCGTAGCCGGCGGCGCCAAGGCCGTGCTCAGCATTGCCAAGCTGGGCATGCAGGCCGGTCTGAAAGCGGCAGGCCCTTGCGCG CTGCAGTTTATGGGCGGTGTCTTTCTCGGGGACGCCATTTTTCGCTTCGGCGTCGCCCCCGTGGCCGAAAAAGTGCTGGGCGGCCTGCACGGCAACCCGG TCGACACCACCACCGGACGCAAACTGCTGATCGACGAGTCCGATTTCAGCCTGCCCGGCCTGATGCCGATCGAGTGGACACGCTTCTACGCCAGCGACCT CGATGTCGACAGCGCGCTGGGCAAGGGCTGGGTGTTGCCCTGGGAACAAAGCCTGCGGCGCAAGGGCAGCTTTCTGTACCTCAGCGACAATCAGGGCCGC AGCGTGCCCTTCGTGACACTGGACTACAACCAGCGCATCTACAACGCACAGGAACAGCTGTACCTGGTGCGTACCGAGGGTGGTCATTACCTGCTGCAAA CACTGGATAACGTCTTTTACTACTTCGGTGAAGTGCCCGACGACAACCAGCCAGTTCCCCTGCAACGCGTCGAAAACGCCCTCGGTCATTTTCTGCATTT CGTACGCAGCGAAGACGGCGTTCTGACCGACATTTGCTCCACCGGCGGGCATCGCGTGCACCTGCACTACGACGAGGTGACCAACCGTCTGAGCACCGTC AAGCGAATCGTCGGCGACCAGGCCGTCGAGACACTGGTGCGCTATGGCTACGACAACAATGGCCAGTTGAACAGTGTGTACAACCGCAATGACGACTCGG TGCGCAACTTCAGCTACACCGATGGCCTGATGACCCGCCACGCCAATGCGCTGGGGCTCAGTTGCGAATACCGCTGGGAAGTTCTCGACGGCAAGCCGCG CGTGGTCGAGCACTGGACCAGCGACGGCGAGCACTTTCATTTCGATTATGATTTCGAGGCGCGCCAGACGCGCGTAACCGATGTGCTGGGGCGTCGCGCC GAGGTGACCTACAACAAGGACCGTCGCGTCATCGCCAGCACTGATTTCGGCGGTGAGCAGTACCGTATCGCGCTGGACGACACCGGCAATATCACCGGTC TGACGCTGCCTGACGGCAATCAACTGAGCTTCGAATACGACGATCTGTCACGCCTGACCGCAGAAACCGACCCGCTGGGCCGAACCACGCGTTATCAGCA TCACTACAAGACCACACTGGTCAAACAGATCGCTTACCCTGACGGCGCCATCTGGACGGCCCGCTACGATTCGAAAGGCAATCTGGTTGCCGAGATCGAC GCGCTGGGTCAAAAGACCGAATACCTCAACAGCGAAGATGGCCTGCCACACACCATCATCGATGCGACCTACAAATCCAAATACCTGTGGTGGAACAACC TGGCGCAGGTCGAGCGCTTCCAGGACTGCTCGGGCAAGAGCACCTGGTACCGTTACGACGAGCGCGATCAACTGGTCGCCGTCACTGATGCCCTGAACAA CACCACCACACTGGAACGCAAACCCGGCGGCGAAGTGCTGAGCATCAACCATCCGGACGGCACCCGCGAGAGCTTCACCTACAACGCCCACGGCCAGGTG CTCACGCACACCAACGGCAAGGACCAGACCACGCATCTGGCACGCAACGCCCGTGGCCTGCCGATCAGACGCCAGGACCCCAAGGGTTTTATCGTAGGCT ACCAGTACGACAAGGCCCTGCGCCTTGCCGCGCTGATCAATGAAAACGACGCCACCTACACGTTCGCCTACGACGACTCCGACCGGTTGATCGAAGAAAA GCGCATCGACCAACTGACCCGCCGTTTCAGCTACAACCTCGGCGGACATCTGACTCAGGTCGAGGAAATCGGCTACAGCGAGAAAGGTGAGCGACCACAG CGCAGCACGCATTTCGAGCGCGACCCGATTGGCCGCTTGCTGGCCAGACTCAACGACGACGCCCGTCAGGATTTCACCTACGACGACAGCGACCGCCTGC TGTCCATTCAGCGCACACCCACTGACGGCGGCAGAAAGATCGGTGTCACGGCTGAAAAACTGGAATTTGCCTACGACATTCTGGGGCGCCTGACGCAGGA GACGTCGCCTCAGGGCACGCTGGCCTACGACTACGATCCACTCAGCAACCTGACCACGTTGACCCTTCCTACCGGCCAGCACCTGAATCACCTGTACTAC GGCAGCGGTCACCTGCATCAACTGAACCTCGATGGCCAACTGATCAGCGACATGGAGCGCGACGACCTGCACCGCGAGATCTATCGCACGCAGGGCAAAC TCACCAGTTGCTTCGGCTATGACGCCCTTGGCCGCAAGGCCTGGCAGTACGCAACCACACTGCCCGCTGAAAAACTCTCACAGATCCAGAACCCGCTCAT TAAGCCAGAGCGCTACATCGAGCACGCCTACAACCCGCTCCACCGCCGCTACGAATACGACCCGGCCGGCGAACTGAGCCGCACCCTCGACAAACTGCGT GGCGAAGTCACGTACGAGTACGAAGCCAACGGCCGCCTGCTCGAACACAACCCCGAAAAACGTTTCGACGGCGAAGAATTCCGCTACGACGCTGCCGGCA ACCGCCTCAACTTCAACACCAGCCGCTTCGACCGCGTCAAAGACAACCGCCTCAAGCAATGGAGCAACCACGAATACAAGTACGACGCGTGGGGCAATCT GGTCGAGAAAATCGTCGGCATCGTCCGTTGGCAAACCTTCACCTACGACAGCGAAAACCGCCTGGTCAAAACCGAGACCATGGCCAACAGTCAGGTGGAA AGCACCAGCAGCTACCAGTACGACAGCCTGGGGAGACGCGTTGGCAAACAGTGGGAGATCAAGGGGCAGACCGACCGGAAACGCTTTCTCTGGCAAGGCC TGCGCTTGCTGCGTGAAGAAAGCCCGGGACAGAGCAGCCTGTACCTGTACGAGCCCGGCAGTTATGCGCCGCTGGCCCGTGTTGATGAGAAAGAGGGCGA GGCAGAGAACAAGGTCTACTACTTCCACACCGACCAGATTGGTACGCCACTGGAGATGACCGACGCCGAGGGGCAGATCGTCTGGCAGGCCAAATATCGG CCGTGGGGGGCGATTGAGAAGCTGGTGGTGAACGAGGTCGAGCAGAACCTGAGGTTTCAGGGACAGTATTTCGATGTGGAGACGGGGCTTCACTACAACA CGTTTCGGTATTACGATCCTGAGATTGGACGGTTTATTACGCAGGATCCGATTGGGTTGAGTGGTGGGGATAATCTCTATCAATATGCACCTAATCCTAA TGGGTGGGTTGATCCATTCGGTCTTTCATGTACTTCTGATGCGAGACTATTAAGAGCAAATCTCGGTAGCAGCCCGTTGGGTGGTGGAAAGTTTGATGCT CATCATATTGTGCTATCCAACTCAAAAGACCCAATGATGAAAGCATTACGTGAACAGATGGAAGGCTTTAACATAAAAATCAATGACAAACGTAATGGGA TCTGGCTTCCTAACAATGAGTCAGACAGAATTCCCGGCACAAATACAACTCCACACAAAGGCGCCGGAGTCCATGGGAAAGCTTACAGGCAACATATATT TGAAACCTTGTCTGGCGCACAGACAAGAGAAGAATTTCTAAACTCTCTAAGCATGATTAAAAAATCGTTAACTGATGGAATAGAGTTTCCAAAAGCGAGG TAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCCAATGAGCCATGAAGACTTAATAGCATTTAAAAATTTGACCTTGGAGAAATTGGAAAATGATGATTTTCGAAAAGCTTTTTTATTTAATACTAACCT AGACTATAAGGTTTCCTGGTCTAAGGGGCCTGCATGTTCTATTATACCTTTAGACTTAGAAATGTCAGGCGTAAAGCCTGTCGAATTTTTAGCTCAAGAA CCAAAAAACAAAAAGAATGTTTATAAACATTACTTTTTAGACACCACCTTAATTAGAATCGAATCATTCGATAGGGCTGGGCTACTCAGTGAAATTGAGA CAGCATCGACAGACGGCGGGATAAAATACTCTCTTCGAAAGAATAATTTCGGAGAAGTTAATTGGCTGAAAGCTGTCGAGTTTGAAGAAGGACTTCCTAT TAGGGCGTGCAGAATAGATTCCGATTCAGAATTTTGGAGTTACCGTTACAAATGGGAAAACATGAAAGTTGTGGAAATCACAACCTTCTCAAGCAATAGC
Amino Acid Sequence
>Rhs family protein
MFEAARLLDEIEHTGAMAGFVLGAIVGIAAVAYVSLTVATCGFGGFLLAMAVGLAGNAIASIGESIGSAFSSPAGQIESASPNVFINGRPAAFAIESTAV CDKHSPIVKVAEGSSNVFINGQPAARKGDKLTCGAKIGTGSPNVFIGGGTQRYLPVDDEVSAMARYTVDILLVVAGGAKAVLSIAKLGMQAGLKAAGPCA LQFMGGVFLGDAIFRFGVAPVAEKVLGGLHGNPVDTTTGRKLLIDESDFSLPGLMPIEWTRFYASDLDVDSALGKGWVLPWEQSLRRKGSFLYLSDNQGR SVPFVTLDYNQRIYNAQEQLYLVRTEGGHYLLQTLDNVFYYFGEVPDDNQPVPLQRVENALGHFLHFVRSEDGVLTDICSTGGHRVHLHYDEVTNRLSTV KRIVGDQAVETLVRYGYDNNGQLNSVYNRNDDSVRNFSYTDGLMTRHANALGLSCEYRWEVLDGKPRVVEHWTSDGEHFHFDYDFEARQTRVTDVLGRRA EVTYNKDRRVIASTDFGGEQYRIALDDTGNITGLTLPDGNQLSFEYDDLSRLTAETDPLGRTTRYQHHYKTTLVKQIAYPDGAIWTARYDSKGNLVAEID ALGQKTEYLNSEDGLPHTIIDATYKSKYLWWNNLAQVERFQDCSGKSTWYRYDERDQLVAVTDALNNTTTLERKPGGEVLSINHPDGTRESFTYNAHGQV LTHTNGKDQTTHLARNARGLPIRRQDPKGFIVGYQYDKALRLAALINENDATYTFAYDDSDRLIEEKRIDQLTRRFSYNLGGHLTQVEEIGYSEKGERPQ RSTHFERDPIGRLLARLNDDARQDFTYDDSDRLLSIQRTPTDGGRKIGVTAEKLEFAYDILGRLTQETSPQGTLAYDYDPLSNLTTLTLPTGQHLNHLYY GSGHLHQLNLDGQLISDMERDDLHREIYRTQGKLTSCFGYDALGRKAWQYATTLPAEKLSQIQNPLIKPERYIEHAYNPLHRRYEYDPAGELSRTLDKLR GEVTYEYEANGRLLEHNPEKRFDGEEFRYDAAGNRLNFNTSRFDRVKDNRLKQWSNHEYKYDAWGNLVEKIVGIVRWQTFTYDSENRLVKTETMANSQVE STSSYQYDSLGRRVGKQWEIKGQTDRKRFLWQGLRLLREESPGQSSLYLYEPGSYAPLARVDEKEGEAENKVYYFHTDQIGTPLEMTDAEGQIVWQAKYR PWGAIEKLVVNEVEQNLRFQGQYFDVETGLHYNTFRYYDPEIGRFITQDPIGLSGGDNLYQYAPNPNGWVDPFGLSCTSDARLLRANLGSSPLGGGKFDA HHIVLSNSKDPMMKALREQMEGFNIKINDKRNGIWLPNNESDRIPGTNTTPHKGAGVHGKAYRQHIFETLSGAQTREEFLNSLSMIKKSLTDGIEFPKAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site