Pseudomonas stutzeri T13, B319_RS0102605
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri T13 contig000003, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGAGGAAACCTACTCGCTGGCGATGACCGCTGCCGAGGCACAGGCGCATAGCTCGGCCAAGGTGGGTTTCGGGGTTACCGGCACCGACATCAGCCTCA GCGCCCTGGCCAAGTGTCGCGCGGCGGTCTACAGCGCCCGTCGGCTGGAGCAGGTCGAGCCGGCATTGCGTGAGCGCTACTTCCTGTCGTTACCCGATGA TCGTTTTGAAGTCGTCCCTGATCTCGCTGCACGCGTTTGCTTTGCAAGGCTCAATGTGCTGGAGCTGGCGAATTCGCCGATCTCCGGCATGGACGTCATT TTTTGCCAGAACCTGTTGATCTACTTCCGCCGCTGGCGTCGTCGCGACATCCTCAATCGCCTGGCCGAGTGCCTGGCCCCAGGGGGACTGCTGGTGATAG GCGTAGGCGAGGTGGTCGGCTGGCAACATCCGGATCTGCTTCCGGTTGCCAATGATCAGGTTCTGGCTTTTACCCGGAAAAGTTTATGAGCGGAGTCGCT
|
|
| DNA Sequence for Gene |
>B319_RS0102605
ATGGGTGATCGGCACGATTATGTCGCCCTGGAGTGGGTGAAAGGCGAGATTGCCGAAACGCTTAAGCAGGCGCGTCAGGCGCTGGAGGCGTTCGTCGAGA ATCCACAGGACTCGACTCGGATGAGCTTTTGCCTGACCTATGTGCATCAGGTACATGGCACTCTGCAGATGGTCGAGTTCTTCGGCGCGGCACTGCTCGC CGAGGAAATGGAGCAGCTCGCGCGTGCGCTGCTCGAAGGCCGCGTGGCCAACCAGGGCGAAGCGCTCGAGGTGATGATGCAGGCCATCCTGCAGCTTCCC GTCTATCTGGATCGCATCCAGAGCGCCCGTCGCGACCTGCCGATGGTCGTCCTGCCGTTGCTCAATGATCTGCGTGCCGCCCGTGGCGAAAAGCTGCTCT CGGAAACCAGTCTATTCTCGCCCGATCTCTCCGGGCGCACCCCGGCGCTTTCCCGCGAGTCCGTCGAGCGCCTGCGCACCGAGGAGCTGCCGGCGTTGCT GCGCAAGCTGCGCCAGATGCTGCAAGTCGCACTGGTGGGCGTGATCCGCAACCAGGATCTTCCGACCAATCTGGGCTATATGGCTCGGGTATTTGCCCGC CTGGAACAGCTTTGCAAGGATGCGCCGCTGGCTGCGCTCTGGCAGATCGCTTCGGGGCTGGTCGAAGGCCTGGCCAGTGGTGGTGTGAGCAACGGCACAT CGGTTCGCACCCTGCTGCGGCAGGTGGACAAGCAGCTCAAGCGGCTAGTCGAGGAGGGCGCAGATGGTATCAACCAGGCTGCGCCTGATGAGTTGATCAA GAACCTGCTCTTCTATGTCGCCAAGGCGCCCGGGCAGACGCCGCGCATCCAGACGCTCAAGCAGCACTATCGCCTCGATGAAGCGCTGCCGGACAGCGCC GTGGTTGATCAGGAACGCGCCCAGCTGGCTGGCCCGGACCGAGGCGCCATGCGCTCGGTGGTCACGGCACTGTGCGAAGAACTGGTCCGCGTGAAGGACA GTCTTGACCTGTTCGTGCGTAGTGATCGCAAGGTCATTTCCGAGCTTGCGAGCCTCGAAGTGCCGCTCAAGCAGATCGCCGATACCCTGGCGGTGCTCGG CTTCGCGCAGCCGCGCAAGATCATTCTCGACCAGATCGCATTGGTCCAGTCCGTTGCGCAGGGACGGCAGGCGCCCGACGACGCAGTGCTGATGGATATC GCCGGAGCATTGCTCTATGTCGAGGCCACGCTCGCCGGCATGGTCGGAGGCCCTGCGGAGGAGCGCAGCGAAGCGAATCATCTGCCGACCACCGATGTGG CTCAGATTCACCAGCTGGTTATTCGCGAAGCGCGCAACGGGCTGGAACAGGCGAAGGATGCGATCATCGAGTTCATCGCCTCGCAATGGAATCACGAGCA CCTGGCGCGCGTTCCCGATCTGCTGACCCAGGTCCGTGGCGGGCTGGCCATGATTCCGCTGGAGCGTGCTGCAGCGCTGCTGCATGCTTGTAACAGCTAC ATTCAGGACCAGCTGTTGGCCCGCCAGGCTGTGCCTGACTGGCAGAGCCTGGACACCCTGGCGGATGCGATCACCAGCGTCGAGTACTACCTGGAGCGAC TGTCGGAAGACTGCGGGACGCAAGGCGACCTGATTCTCGATGTCGCCGAGGAGAGTCTGCAGAACCTGGGTTATTCGCTGGGACAAGAAAAGCCGCAACC GGTAGAGCAGATCGCCGAATCCGAGATGCTGGATCCGCTGGACGAGATCGAAGTGCTTCCGGAAGAGCCGGAGGTGAGTCCCGAGACGTTTGCCTTTGCC GAGCCCTCTGAAGAAGGACAACTGGACGCATCGGAGCCGGCGTTCGTCAGCGAGTCGCAATTGCTGCTCGACGCCGCGGAAGCCGAACCCGAAATCGAGG CGGTGGAATTCGAGCCCGAGTGGACACTAGGGGATTCAACCTCCACGGACGATGAGATCGTCTTCAGTCTCCCGGATGATCAGTCGTCGGCTGCTCCGGC CCTTGCCGAGACGGCGGGCGAGGAGCCGAGCCTGGACGACTGGAGCGTGGCGCAGGTTGCCGAGCTCGATCTTCCCGAAGTGACCCTGCCTGACTTCACG CAGCCCGAAGCAGCTCCCGTTGTCGAACCCGAGCCGGCAATCAGCCTGGAGCAGGTGATGGCCGCGCCGGTTACCGCCATCAATCCGCCGGCACAGGATG TTCCTCCAAGCCTCCTGCCTCCGCCTGCTGACGAGGAGCCGGTCGATGAAGACCTGCTTGAAGTCTTCATCGAAGAGGCCGCTGAAGTCTTGGAAACCAT CGGCGAATACCTGCCGCGCTGGTTCTCCGACAGTGATGACAAGGATGCACTGGGTGAAGTCCGCCGTGCATTCCACACCCTCAAGGGCAGCGGACGGATG GTGCGGGCGCTGATCATCGGCGAACTCGCATGGTCCATCGAGAACCTGCTCAATCGCGTCCTGGATCGCACCATCGTCGCCGGCGATTCGGTCAGGCAGG TGGTGCGTGACGTCGTCGAGCTGATGCCAGCGCTGGTCGAGGAGTTCGCCGCCAAGGCGCAGCGCCAGCGTGACGATGTCGATCGATTGGCCGCCACCGC ACATGCGCTGGCCAAGGGGCAGCCGGTAGCGCTGCCTCAGCCCGTCGCTGAGGTTGTCGAGGCCTTTTTGCCTGACGTGGACCCAGAGCCCGCACCGATC GCCGAAGCGCCTCAGGCGGTTCTGCCTGAAAACGATGACGATGCGCTGGACCCGCAGTTGCTGGAAATCTTTCGCAACGAGGCAGAGTCGCACCTGACCA CGCTCGTCAGCTTTCTCGCAGATTGCGCGCAACGCCTGCCCCAACCGGTGACCGATGCATTGCAGCGCGCGCTGCACACCCTCAAGGGCAGTGCGCACAT GGCCGGCATCCTGCCCGTTGCGGAAATCGCGACGCCGTTGGAAAAGATGGTCAAGGAATTCAAGACCAACCTGATCCAGATGGACCTGGCGGAAGCCGAG TTGCTGCACGAGGCCGAGTCGCTGCTGCGGCAGGGGCTGGTCAATCTCGACCATGAACCGCTGGCACCGATCGAAGGGGCCCCCGCGTTCCTGGCCAAGG TGCATGCGTTGCATCAGGCGCGACTGGTCGAGGCGGGTGCCCGCCAGCAGAACGATGCAGGCGAGGCGCGCGATCCGAGCATGATTGCGCTGTTTCTCTC CGAAGGCATGGATATTCTGCTGGACGCAGAAGACTTGTTGCGCAGCTGGCGTGAGCATCCGGCCGAGCGCCAGGAGCTGTCCGCCCTGCTGCAGGAGCTG ACCACGCTCGGGCAGGGCGCCAAGATGGCCGATCTGCCGCAGATGGAGGCCCTGTGTCAGGTCCTGCTGCGCCTGTATGCCGTCGTCGAAGAGGGCCGAC TCGCCGTCAGCGAGCGCTTCTTCGATGATGTAGAGCGCGGTCATGAAGCGCTGGTCGGGATGATGGACCAGGTGGCGGCAGCGCTGCAGGTCAGCGAGCA GTCTGAACTGCTGGCGCGTCTGGAGGCGTTGCTGGCCGAGGCGATAGACCCGCTGGATCTTGCGCAGTCATTTGCCGAGCCGCAGGTTGCATCGTCCGAG CCCGCGCCAGTTACACAATTGGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCGTGGCCGGCCGATCCTGTGGTGGACG AAGCGCAGGATGACCTCGATCATGAAATGGTCGAGATATTTCTCGATGAAGCGGTCGATCTCATGGAGAGCGCAGGCCAGGCGCTGGATCGCTGGCTTGC CGATCCCGCCAATCAGATGGCCCTCTCGGCGCTGTTGCGCGACCTGCATACCCTCAAGGGTGGCGCCCGGATGGCCTCCATTCGCCCGATCGGCGACCTG GCGCACGAGCTTGAATCGCTCTATGAGGGTCTCTCCGACGGCCGTTACGTCCACTCCGTCGAGTTGGCGACGCTGTTGCAGCGTAGCCACGATCACCTGG CCCTGCAGCTCGAGCAATTGCAACGCCAGCTGCCGATGAGCTGCGCCGATGCTCTGATCGAGTCGATGCGCGCCTTTCGTCAGGGCGCTTTTCCTGCGTT CGAAGCCGAGGACGTAGTGGCCGAGGCGCAGCCGGATCAGGGTAATGAGTCCCATACGTTCGAGGAGCCACTCGAGGGCGAGGACGCTTTTGACGCTGTG CCGGACCAGCCGGTCATGGAGGTCATCGATCTGCCACTGGCTGACGTCGATGAGTCATTCACCAGCGAAGAGGGTGAAGCAGTCAGTCCCCTGGAGGACG TCGAAGCCACCGAGGCCTCGTTCAGCGAAGCGCAGGACGAGATCGAGCTCGAATTGCCTGAAATCGAAGAGGCGCCCGCGTCGTTCGAGGTGGCCGCGGA TGCCCCGCGAGTCGAAGCGGTCGATCGTCAGCCAGAGCTGGTAGATCGCGACCCCGAGCTGGTGGAGATCTTCCTGGAGGAGGGCTTCGACCTTATCGAA AGCGCGGCCGGCGGGTTGCAGCGCTGGATGGCGGATGTCGACAACAGCTTCGAGCTCGAAGCACTGCAGCGGGACCTGCACACCCTCAAGGGTGGCGCAC GGATGGCGGATATCCGCGAGATCGGTGATCTCGCCCATGAACTCGAGTTTCTCTATGAGGGGCTGTGCGCGGGCAGCTACCGAGCCAGTTCCGAGCTGTT CGGCCTCCTGCAGGCCTGCCAGGACCGCCTGGCGGAGATGCTCGAAGCTGTGCGGGCGCACAATCCGATCCCTAGCGGTGATGCGCTGATCGAGACGATT CGCCGATTTCGCAACAACCCCGAGGAACAGCTGAGCATCCCCAGCAGCGTATCGCTGAAGGCTGCGCAGGAGGATGCGCAGCAGTCGGCCGAGGCCGAGA TCCTCGATATCTTCGTCGAGGAAGCGGACGACCTGCTGGAAGAGATGGAGTCGGCCCTGGGCCGCTGGGATGCTGGCCGCGAGGACGCGGCTCCCCTGGC TGACATGCTTCGCGTGTTGCACACCCTCAAGGGCGGGGCACGCCTGGCGGGGCAGACTGCCCTGGGCAACATGGCCCATGATCTGGAGCAGCGCCTGAGC GAGGCGCAGCAACAGGGCGCCCCCTGGCCGGACAGTCTGTTCCTCGATGTACAACAGGGTTATGACGCGCTGCTCAAGGACGTCGAGCAGTTGCGCGACA GCCTTGCCAGCGATAGCGCCGAGCCGCTGTATTCGGAGCCACAGCATGCGGAGCTGCAGGAGACCGAGTCGTCGTTGCCGAGCGAGCCGCTGACACTGCC GCAGCCGATCGTTGCGGCGAGCAGCCAGCCGGCGCCAAGCGCTGCGCCGGCAAAGGTCCTGCCGTTTATTCGGCGCGCCCAGCAGGCCGCTCAGGAAGCC GCTGCGCGTCGAGCACCGCAAGAACTGGTCAAGGTGCCGGCGGAACTGCTGGAAGGGCTTGTCAACCTGGCTGGTGAAACCTCGATCTTCCGTGGCCGGG TGGAGCAGCAAGTCAGCGACGTCGGGTTCACGCTCGGCGAAATGGAAGCGACCATCGAGCGCGTGCGCGATCAGCTGCGCCGCCTGGATACCGAAACCCA GGCGCAGATTCTCAGCCGTTATCAGGCCGAGGCCGAGCGGGCCGGCTATGACGATTTCGATCCGCTGGAGATGGACCGCCATTCGCAGCTGCAGCAGCTG TCCCGTGCGCTGTTCGAGTCGGCCTCCGACTTGCTCGACCTGAAGGAAACCCTCGCTGCGCGTAACCGCGATGCCGAAACCCTGCTGCTGCAGCAAGCAC GCGTCAATACCGAGCTTCAGGAAGGCCTCATGCGTACGCGCATGGTGCCCTTCGAGCGGCTGGTGCCGCGTCTGCGTCGTATCGTCCGGCAGGTGGCCGG TGAACTCGGCAAGCAGGTCGAGTTCCTGGTCGGCAACGCCACCGGCGAGATGGACCGCAGCGTGCTCGAGCGGATCGTCGCGCCGCTAGAGCATATGCTG CGCAATGCCGTGGACCACGGTATCGAGTCGGTCGAGCGGCGCCGTGCCGCCGGCAAATCCGAGCAGGGCACGATCCGCCTGGATCTGGCGCGTGAAGGCG GCGATATCGTCCTGACGCTGGCGGACGACGGTGGCGGCATCAACCTCGAGGCGGTGCGGCGCAAGGCGATCGAACGCGGCCTGATGTCCGCCGACAGCGG TCTGTCCGAACACGAGATCCTGCAATTCATCCTCGAGGCCGGTTTCTCCACCGCCGAGCGCGTCACGCAGATCTCCGGCCGTGGTGTCGGCATGGACGTG GTGCATTCGGAGGTCAAGCAGCTCGGTGGCTCCATGAGCATCGAATCGACGCTGGGCCAGGGCACGCGTTTCCTGATTCGCCTGCCGTTCACGGTGTCGG TCAACCGGGCGCTGATGGTCTACTCGGGCGAGGACCTCTATGCGATCCCGCTGAACACCATCGAAGGTATCGTGCGGGTTTCGCCGTACGAGCTGGAGGC TTACTACCAGCCGGATGCGCCGCGCTTCGAATATGCCGGTCAGGCCTACGAGCTGCGTTACCTCGGCGATCTGCTGAACAACGGGCAGAAGCCGAAGCTG GTCGGACAGAGTCTGCCGCTGCCGGTGATTCTGGTGCGTTCCAAGGAGCACAGTGTCGCGGTGCAGGTCGACAGCCTGGCCGGCTCGCGCGAGATCGTGG TGAAGAGCCTCGGCCCGCAGTTCGCCGGCGTCCATGGCATCTCCGGCGCGACCATCCTCGGCGACGGTCGCGTGGTGGTGATTCTCGATCTGCTGGCCAC CATTCGTGTCCTGCATGCGCATCAGATCATTCAGCAGCAACAGCCGAGGCTGATCGATCAGCTGCCCGAATCCGTCGAGGTGGAAAGCGAGCGGCCGACG CTTGTCATGGTGGTCGACGACTCGGTCACTGTGCGCAAGGTCACCAGCCGCCTGCTGGAGCGCAACGGCATGAACGTGCTGACCGCCAAGGATGGGGTGG ATGCGATCACCCAGCTGCAGGAGCGCAAGCCGGACATCATGCTGCTGGATATCGAGATGCCTCGCATGGACGGCTTCGAGGTCGCCACGCTGGTTCGCCA TGACGAGCGCCTCAAGGACCTGCCGATCGTCATGATCACTTCGCGTACTGGCGAGAAGCACCGGGATCGCGCGTTGAGCATCGGTGTCAACGAATACCTG GGCAAGCCGTACCAGGAGTCCGTCCTGCTCGAGGCCATCCAGCGCCTGGTCCACGCCGATGTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGTGCTCTCCACCCGTATTGCGGTACTCGCCGATACCTCGCTGCAGCGTCACGTGCTGCAGCAGGCGTTGACCGGAAGTGGCTATCAGGTGGTGCTGAAC AACGACCCGGCGCGTCTTGAACCTGCCGATCTGGATAGCACCGAAGCTGACCTGTGGCTGGTGGATCTGGCCCAGACCGAAGACTCCCCGCTGGTGGATG CCTTGCTGGAGCGCGACACCACGCGGGTGCTGTTCGGCGAAGGGCATGCGCCGGAACGCCATTCGGAGTTCTACCCACGCTGGGAGCGCAGCCTGTTCAG CAAGCTCAAGCGCCTGGTGGGCGATCCGTCGCGTGCCGTTGGGCCACGGCTGGACGTGTTGCAGGGTGAAGGGCAGCGTCCGGAGCGACTGACGCTGCCT GCAGTGCTGGCCGATTCCGCGCTGCGTGCCGGAGAACCGGCACATCAGGTCTGGCTGCTGGCAGCCTCGCTGGGCGGGCCGGAGGCGGTGAAGGCCTTTC
|
|
| Amino Acid Sequence |
>chemotaxis protein CheA
MGDRHDYVALEWVKGEIAETLKQARQALEAFVENPQDSTRMSFCLTYVHQVHGTLQMVEFFGAALLAEEMEQLARALLEGRVANQGEALEVMMQAILQLP VYLDRIQSARRDLPMVVLPLLNDLRAARGEKLLSETSLFSPDLSGRTPALSRESVERLRTEELPALLRKLRQMLQVALVGVIRNQDLPTNLGYMARVFAR LEQLCKDAPLAALWQIASGLVEGLASGGVSNGTSVRTLLRQVDKQLKRLVEEGADGINQAAPDELIKNLLFYVAKAPGQTPRIQTLKQHYRLDEALPDSA VVDQERAQLAGPDRGAMRSVVTALCEELVRVKDSLDLFVRSDRKVISELASLEVPLKQIADTLAVLGFAQPRKIILDQIALVQSVAQGRQAPDDAVLMDI AGALLYVEATLAGMVGGPAEERSEANHLPTTDVAQIHQLVIREARNGLEQAKDAIIEFIASQWNHEHLARVPDLLTQVRGGLAMIPLERAAALLHACNSY IQDQLLARQAVPDWQSLDTLADAITSVEYYLERLSEDCGTQGDLILDVAEESLQNLGYSLGQEKPQPVEQIAESEMLDPLDEIEVLPEEPEVSPETFAFA EPSEEGQLDASEPAFVSESQLLLDAAEAEPEIEAVEFEPEWTLGDSTSTDDEIVFSLPDDQSSAAPALAETAGEEPSLDDWSVAQVAELDLPEVTLPDFT QPEAAPVVEPEPAISLEQVMAAPVTAINPPAQDVPPSLLPPPADEEPVDEDLLEVFIEEAAEVLETIGEYLPRWFSDSDDKDALGEVRRAFHTLKGSGRM VRALIIGELAWSIENLLNRVLDRTIVAGDSVRQVVRDVVELMPALVEEFAAKAQRQRDDVDRLAATAHALAKGQPVALPQPVAEVVEAFLPDVDPEPAPI AEAPQAVLPENDDDALDPQLLEIFRNEAESHLTTLVSFLADCAQRLPQPVTDALQRALHTLKGSAHMAGILPVAEIATPLEKMVKEFKTNLIQMDLAEAE LLHEAESLLRQGLVNLDHEPLAPIEGAPAFLAKVHALHQARLVEAGARQQNDAGEARDPSMIALFLSEGMDILLDAEDLLRSWREHPAERQELSALLQEL TTLGQGAKMADLPQMEALCQVLLRLYAVVEEGRLAVSERFFDDVERGHEALVGMMDQVAAALQVSEQSELLARLEALLAEAIDPLDLAQSFAEPQVASSE PAPVTQLEAEAEAEAEAEAEAEAEAWPADPVVDEAQDDLDHEMVEIFLDEAVDLMESAGQALDRWLADPANQMALSALLRDLHTLKGGARMASIRPIGDL AHELESLYEGLSDGRYVHSVELATLLQRSHDHLALQLEQLQRQLPMSCADALIESMRAFRQGAFPAFEAEDVVAEAQPDQGNESHTFEEPLEGEDAFDAV PDQPVMEVIDLPLADVDESFTSEEGEAVSPLEDVEATEASFSEAQDEIELELPEIEEAPASFEVAADAPRVEAVDRQPELVDRDPELVEIFLEEGFDLIE SAAGGLQRWMADVDNSFELEALQRDLHTLKGGARMADIREIGDLAHELEFLYEGLCAGSYRASSELFGLLQACQDRLAEMLEAVRAHNPIPSGDALIETI RRFRNNPEEQLSIPSSVSLKAAQEDAQQSAEAEILDIFVEEADDLLEEMESALGRWDAGREDAAPLADMLRVLHTLKGGARLAGQTALGNMAHDLEQRLS EAQQQGAPWPDSLFLDVQQGYDALLKDVEQLRDSLASDSAEPLYSEPQHAELQETESSLPSEPLTLPQPIVAASSQPAPSAAPAKVLPFIRRAQQAAQEA AARRAPQELVKVPAELLEGLVNLAGETSIFRGRVEQQVSDVGFTLGEMEATIERVRDQLRRLDTETQAQILSRYQAEAERAGYDDFDPLEMDRHSQLQQL SRALFESASDLLDLKETLAARNRDAETLLLQQARVNTELQEGLMRTRMVPFERLVPRLRRIVRQVAGELGKQVEFLVGNATGEMDRSVLERIVAPLEHML RNAVDHGIESVERRRAAGKSEQGTIRLDLAREGGDIVLTLADDGGGINLEAVRRKAIERGLMSADSGLSEHEILQFILEAGFSTAERVTQISGRGVGMDV VHSEVKQLGGSMSIESTLGQGTRFLIRLPFTVSVNRALMVYSGEDLYAIPLNTIEGIVRVSPYELEAYYQPDAPRFEYAGQAYELRYLGDLLNNGQKPKL VGQSLPLPVILVRSKEHSVAVQVDSLAGSREIVVKSLGPQFAGVHGISGATILGDGRVVVILDLLATIRVLHAHQIIQQQQPRLIDQLPESVEVESERPT LVMVVDDSVTVRKVTSRLLERNGMNVLTAKDGVDAITQLQERKPDIMLLDIEMPRMDGFEVATLVRHDERLKDLPIVMITSRTGEKHRDRALSIGVNEYL GKPYQESVLLEAIQRLVHADV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|