Pseudomonas stutzeri T13, B319_RS0102605

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47226
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 130 5.1E-22
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1630 1761 3.2E-24
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1242 1341 2.1E-14
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1995 2131 5.9E-15
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1484 1581 2.4E-4
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2092 2110 3.2E-10
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 1487 2417 0.0
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 2301 2417 3.84E-35
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1633 1740 4.32E-20
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 917 1011 5.26106E-5
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1240 1332 1.30212E-12
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1633 1726 2.9E-14
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1059 1184 5.6E-13
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 136 1.1E-9
MobiDBLite mobidb-lite consensus disorder prediction - - 1750 1765 -
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1632 1736 3.64802E-11
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1991 2132 2.2E-23
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 749 838 2.69088E-10
SMART SM00260 chew_2 IPR002545 CheW-like domain 2124 2268 1.6E-32
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 100 4.0E-7
MobiDBLite mobidb-lite consensus disorder prediction - - 1736 1765 -
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 2131 2264 6.8E-24
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 2302 2414 1.6E-26
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1484 1613 4.9E-26
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2036 2050 3.2E-10
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1807 1946 1.9E-10
MobiDBLite mobidb-lite consensus disorder prediction - - 1193 1230 -
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 2300 2413 4.6E-35
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 2302 2413 2.20696E-30
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 749 874 5.13E-27
Coils Coil Coil - - 1685 1705 -
Coils Coil Coil - - 1204 1224 -
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 2206 2267 2.3E-20
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1240 1362 6.67E-26
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 433 556 2.0E-15
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1240 1337 6.2E-5
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1631 1735 1.1E-4
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1945 2131 1.9E-53
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1947 2131 2.4E-61
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2116 2129 3.2E-10
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 905 1011 1.9E-16
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 919 1010 1.0E-10
Coils Coil Coil - - 1845 1865 -
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 751 843 2.7E-13
Gene3D G3DSA:3.40.50.2300 - - - 2302 2420 5.9E-39
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 917 1013 0.16
Coils Coil Coil - - 1323 1343 -
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1058 1179 7.4E-14
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1484 1582 3.27681E-14
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1238 1366 2.4E-26
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 917 1038 8.37E-17
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1486 1586 5.8E-13
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 743 873 8.4E-27
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1484 1606 3.01E-25
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 749 846 5.1E-9
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 2137 2269 8.4E-23
CDD cd16916 HATPase_CheA-like - - 1954 2129 5.63659E-82
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1948 2129 1.44E-36

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.