Pseudomonas veronii 1YdBTEX2, H736_RS0105305
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas veronii 1YdBTEX2 Contig7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACGCCATCGAACCAGATCCTCACCGGCATGGCGCTGTTCTTGACGCTGTTCATCATGGCGCCGGTCTTCGACAAGGTGAACCAGCAAGCCCTGCAGCCT TACCTCGCGGAAAAGCTCACGGCGCAAGACGCCATCGACAAGGCCCAAGGCCCGATCAAAGACTTCATGCTGTCGCAGACCCGCTCCAGCGACCTTGAGC TGTTCATGCGCCTGTCCAAGCGCACCGACATCGCCACGCCGGACCAGGCGCCGCTGACGATCCTGGTGCCGGCGTTCGTCACCTCGGAACTGAAGACGGC GTTCCAGATCGGTTTCATGATCTTTATCCCGTTCCTGATCATCGACCTGGTGGTGGCGAGCGTGCTGATGGCCATGGGGATGATGATGCTGTCGCCGCTG ATCATCTCGTTGCCGTTCAAGATCATGCTGTTTGTGCTGGTGGACGGCTGGGCACTGATCATCGGCACGTTGGCCAGCAGTTTCGGCGGAGTGTAGGGCT
|
|
| DNA Sequence for Gene |
>H736_RS0105305
ATGACCCCAGAAGTTGCCGTCGACCTGTTCCGTGAAGCGTTGTGGCTGACCACGATGATGGTTGCCGTGCTGGTGGTGCCGAGCCTGTTGGTCGGCCTGT TGGTGGCGATGTTCCAGGCCGCGACCCAGATCAACGAACAAACCCTGAGCTTCCTGCCGCGCCTGCTGGTGATGCTGGTCACCCTGATCGTCGCCGGCCC GTGGCTGGTGCAAACCTTCATGGAATATATCCTGCAGCTGTACGGCAGTATTCCGCAGTTGATCGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGCATGCAATCGCTGCTGGCGTTGACCGACACCCAGATCAGCACCTGGGTAGCCTCGTTTATCCTGCCGCTGTTCCGGGTCACGGCGGTGCTGATGAGC ATGCCGGTGTTCGGCACCACGCTGGTACCACGGCGTATCCGCCTGTACTTCGCGGTGGCGATCACCGTGGTGCTGGTGCCGGGCTTGCCGCCGATGCCTG CGGTCAATGCGCTGGACCTCAGTGCGCTGATGCTGATTGCCGAGCAGATCCTGATCGGCTCGCTGCTGGGCTTCTCCCTGCAACTGTTCTTCCAGGCATT CGTGATCGCCGGGCAAATCATCTCGATCCAGATGGGTATGGGTTTTGCGTCGATGGTCGACCCCACCAACGGCGTGTCGGCGGCGGTGATCGGGCAGTTC CTGACCATGCTGGTGACTTTGATGTTCCTGGCCATGAATGGCCATCTGGTGGTGTTCGAGGTGCTGACCGAAAGTTTCACCACCTTGCCGGTCGGCTCGG
|
|
| Amino Acid Sequence |
>flagellar biosynthesis protein FliQ
MTPEVAVDLFREALWLTTMMVAVLVVPSLLVGLLVAMFQAATQINEQTLSFLPRLLVMLVTLIVAGPWLVQTFMEYILQLYGSIPQLIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|