Pseudomonas veronii 1YdBTEX2, H736_RS0105305

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01313
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01313
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0044780 bacterial-type flagellum assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01402
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF004669 FliQ IPR002191 Bacterial export protein family 3 1 89 1.8E-28
Pfam PF01313 Bacterial export proteins, family 3 IPR002191 Bacterial export protein family 3 6 77 1.1E-27
PRINTS PR00952 Type III secretion system inner membrane Q protein family signature IPR002191 Bacterial export protein family 3 54 76 4.3E-16
PRINTS PR00952 Type III secretion system inner membrane Q protein family signature IPR002191 Bacterial export protein family 3 18 39 4.3E-16
PANTHER PTHR34040 FLAGELLAR BIOSYNTHETIC PROTEIN FLIQ IPR002191 Bacterial export protein family 3 1 88 1.5E-26
NCBIfam TIGR01402 JCVI: flagellar biosynthesis protein FliQ IPR006305 Flagellar biosynthesis protein FliQ 1 88 1.6E-26
PRINTS PR00952 Type III secretion system inner membrane Q protein family signature IPR002191 Bacterial export protein family 3 39 54 4.3E-16

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.