Pseudomonas stutzeri TS44, YO5_11110

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri TS44 Contig00007, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCGGGCTGATGCAGCCCTGGCGCTTCGTGCGCATCACCTCGACCGAGCTGCGCGCACGCATCGCGGCGCTGGTCGAGGCCGAGCGCCAGTGCACCGCCG AGGCGCTGGGCGAGCGTTCTGCCGAGTTCCTGCGGCTCAAGGTCGAGGGCATCCATGACTGCGCCGAGCTGCTGGTCGCGGCGCTGATGGACGGGCGCGA GGCGCACGTGTTCGGTCGGCGCACCCTGCCGGAGATGGACCTCGCCTCGCTGGCCTGCGCGATCCAGAACCTCTGGCTTGCCGCGCGCGCCGAGGGGCTG GGTCTGGGCTGGGTCTCGCTGTTCGATCCGCAGGCGCTGGCCGAGCTGCTCGGCATGCCGGCCGGCGCCAAGCCGATGGCGATCCTCTGCCTCGGGCCGG TGCACGCCTTCTATCCGGCGCCGATGCTGGAGCTGGAGGGCTGGACCCAGGGCCGGCCGCTGGAAGAACTGCTCTACCAGGACCGCTGGGGCGAGCAGCC
DNA Sequence for Gene
>YO5_11110
ATGAGCCTGGCGCTGAGCTGTCTGGCCGGCGTCGTGCTCGATGCGCTGCTCGGCGAGCCCAGGCGGGCGCATCCGCTGGTGGCCTTCGGCCGTCTGGCCG ATGCGCTGGAGCGACGCTTCAACGGCCCCGAAGGACGCGGCTGGCGCAGCCACGGCGTGACCGCCTGGTGCCTGGCGGTGCTGCCGCTGACGGCACTGGC CTGGCTGCTCGCGCGGTTGCCGGGCGTCGGCTGGCTGGTGGAGGTCGTCCTGCTCTACCTCGCCCTCGGTCTGCGCAGCCTCGGCGCCCATGCGCTGCCG GTCGCACGCGCGTTGTGGCGCAACGACCTGGGGGTGGCGCGTCGCTGCGTCGGGCACATCGTCAGCCGTGATACCAGCGCGCTGGATGTGCCCGGTGTAT CCCGCGCGGCCACCGAGTCGGTGCTGGAGAACGGCAGCGATGCGGTGTTCGCCGCGTTGTTCTGGTTCGCCGTCGCCGGCGCGCCGGGCGTGGTGCTTTA TCGGCTGAGCAACACGCTGGATGCCATGTGGGGCTATCGCACCGCGCGCTTCGAGCGCTTCGGCTGGGCGGCGGCGCGGGTCGACGATGGCCTCAACTAC CTGCCGGCGCGCCTCACCGCGCTGACCTATGCGCTGCTCGGCCGGACCCGTCGCGCGCTGCACTGCTGGCGCACTCAGGCGCCGCAATGGGACAGCCCCA ACGCCGGGCCGGTGATGGCTGCCGGTGCCGGTGCGCTGGGTGTGGAGCTGGGTGGGCCCGCGTTCTACCACGGCGAGTGCCACGAACGCCCCGTGCTGGG CCAGGGCAGGGCGCCGGGCGCGCGCGATATCGAGCGTGCGCTGGATCTGGTCTGGGCCGGCGTCGGCGTCTGGCTGCTGGCGCTGCTGCTTGGAGCCTGG CTGCATGCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCACGGCGGACGCCTGCGCGCGGCGGCGCGCCAGTACGGCATCGCGCCGGCCGACTGGCTCGACCTTTCCACCGGCGTGGCGCCCTACACGCCGACCCTG CCGGACATTCCCGTCAGCGCCTGGGCGCGCCTGCCGGAAGCCGACGACGACCTGCCAACCGTGGCGCGGGACTACTACGGCAGCGCCGAGCTGCTGCCGG TGGCCGGTTCGCAGGCGGCGATCCAGGCCTTGCCGCGTCTGCGGCGGCGGGCGCGGGTCGGTGTCGTCGCCCCCTGTTACGCCGAACACGCCGCTGCCTG GCAGCGCGAAGGCCATGCGCTGGTGGAACTGAGCGAAGCCGGCGTGCCGCGTGCGCTGGAGCAGCTCGACGTGCTGGTGGTGATCAATCCGAACAACCCC AGCGGGCGGCTGTTCGACGCGGCGCAGCTGCTGCACTGGCACGCCAGCCTGGCGGCGCGGGGCGGCTGGCTGGTGGTCGACGAGGCGTTCATGGACTGCA
Amino Acid Sequence
>cobalamin biosynthesis protein CobD
MSLALSCLAGVVLDALLGEPRRAHPLVAFGRLADALERRFNGPEGRGWRSHGVTAWCLAVLPLTALAWLLARLPGVGWLVEVVLLYLALGLRSLGAHALP VARALWRNDLGVARRCVGHIVSRDTSALDVPGVSRAATESVLENGSDAVFAALFWFAVAGAPGVVLYRLSNTLDAMWGYRTARFERFGWAAARVDDGLNY LPARLTALTYALLGRTRRALHCWRTQAPQWDSPNAGPVMAAGAGALGVELGGPAFYHGECHERPVLGQGRAPGARDIERALDLVWAGVGVWLLALLLGAW LHA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site