Pseudomonas stutzeri TS44, YO5_11110
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF03186
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0048472 | threonine-phosphate decarboxylase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF03186
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0009236 | cobalamin biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF03186
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF03186 | CobD/Cbib protein | IPR004485 | Cobalamin biosynthesis CobD/CbiB | 8 | 284 | 1.3E-94 |
| NCBIfam | TIGR00380 | JCVI: adenosylcobinamide-phosphate synthase CbiB | IPR004485 | Cobalamin biosynthesis CobD/CbiB | 9 | 258 | 1.0E-53 |
| Hamap | MF_00024 | Cobalamin biosynthesis protein CbiB [cbiB]. | IPR004485 | Cobalamin biosynthesis CobD/CbiB | 1 | 303 | 108.185608 |
| PANTHER | PTHR34308 | COBALAMIN BIOSYNTHESIS PROTEIN CBIB | IPR004485 | Cobalamin biosynthesis CobD/CbiB | 4 | 297 | 1.8E-101 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.