Strain | Pseudomonas pelagia CL-AP6 111.KCCM90073.1_27, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAAACAGGACGGCATTGATACCGAGCAACCAACGCAGGGTGCCGGACTCCTGCTCGGCAGAGATAGCCGTACCCCCGAGCGCCTTAATTGACTCAGGGTC GGCAGCGGCCGTTTCCTGAAGCGAAGCTCCCAGCCCGAGGGTCGCCAGCTTCGCGGTGATAGGCTCAGCCTCGCCATCGTGCACAACCTTCAACTGCCGA TCAGACAGCTCAAAGGACAGCCCGCGAATGTCTTCAAAACCGTTCAGGGCCAGGCGAATCATCCGTTCCTCCGAAGGACAATCCATCTTCGGTACGGTAT ACACACTGATCCAGTTGCCGGACGCTTCAGAGGCCTTCGACCCGGTGTTACCCTCTGCGGGTGTTGTGTCGCAGCCACAGGCGTCTTCACAGGATTTACT CATGATACGGCTCCACTTGCGTATTGTCGGATTATGATTTAAAACCATATAGCCACTATAAGGTCAATAGAGCAGATACCATTTGTTGAGGAGACACCCG
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DNA Sequence for Gene |
>K787_RS0118370
ATGCGCATTGGTCAGTTGGCGCGGTCCGTAGGGGTTGACACCCAGACCATCCGTTTCTATGAGCGAGAGGGCTTGTTACCACCGCCGGATCGTCAGGACA ACGGCTACCGTATTTACACTGAACGGCATGTTGAGCGACTGGCCTTCATCCGGCGCTGCAGAATACTTGAGCTGTCACTCGCTGAAATTCACGAGTTACA GCGTTATCAGGGCGCGCCCCATCAGCCTTGCAGGGCCATCAACACCTTGCTTGATGATCACATCGCTCAGGTACGGTCTCAGATAACCGATCTGCAGGTA CTGGAGAAACAACTTGTGTCGCTGCGAGCAAGTTGTAACGATGATCGGGAAATTGAGGCCTGTGGGGTTCTCGAAGGGCTCAGCGAAGGAAGCATGCAGT AG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TAGCCTGAAGCAGGTATGCTCAGTATTAGGGTAGCCAGCGTGGAAAGACCAATATACTTGCGTAGGTGCTGAACATCCGCTCCCTGGCGGAGTTTTTCGA CAACACGGAGCCTGAGTAGTCGGCAGATAGAGCAAGCACTTCATCATGTCTTGTTTCGTTGAAAAGGCTGCATCAACTGTTGCCAGTAGTTCATTGGTAA TTCGGCGCTGAAACAATACCAAGATCCTTAGTGCTGATCGCTCGCTCGGAATCGTAGTAAGCCGTGCCGTGCAAGGATCTTAGCGGCAATGGGTGAAGTG ATCATTTGTATCACTGCAAAGAATGCGGCAGGAATCGCAATTTCTGAAGGTAAGCCAGATGCGGCGACAAAAGCAGCAGCAATGCTAAATTCTTTTTTGC TCACGGTGAAGAGATAGGTAATCACTTCTTTCCGGTCAGAGGTTAGCAACCGTGAGGACATTCCTATCAGGTAGCCAATCAGATTAAGACTCAGGGCTGC
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Amino Acid Sequence |
>MerR family transcriptional regulator
MRIGQLARSVGVDTQTIRFYEREGLLPPPDRQDNGYRIYTERHVERLAFIRRCRILELSLAEIHELQRYQGAPHQPCRAINTLLDDHIAQVRSQITDLQV LEKQLVSLRASCNDDREIEACGVLEGLSEGSMQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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