Pseudomonas pelagia CL-AP6, K787_RS0100515

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00611
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003697 single-stranded DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00611
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00611
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1050.90 - IPR042174 DNA-binding RecF, domain 2 121 300 1.6E-87
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 1 342 3.14E-34
PANTHER PTHR32182 DNA REPLICATION AND REPAIR PROTEIN RECF - - 1 362 3.5E-41
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 6 335 1.6E-87
NCBIfam TIGR00611 JCVI: DNA replication and repair protein RecF IPR001238 DNA-binding, RecF 1 360 6.9E-110
Pfam PF02463 RecF/RecN/SMC N terminal domain IPR003395 RecF/RecN/SMC, N-terminal 3 356 5.6E-32
Hamap MF_00365 DNA replication and repair protein RecF [recF]. IPR001238 DNA-binding, RecF 1 368 90.067688

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.