Pseudomonas sp. PAMC 26793, D109_RS0104420
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 26793 ctg7180000039290, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAGTACTGCGGCCTACACGCCTGTTCCACGTTTCATACACATTTTACCCACAGCGTTATCCACAGGTAGTGCGTTGCCATACCCCCTAAAACGCATTAT CTTGTAGGTCGTCGCCAAAAAAACCCTACATGTAGGGTTTTTGAGCGAAAAGACCAAACACAAATCAGACAAGAAACTCAAGTTCTTTCTTGCTCCTGTT TGGTTGAACTTAAGCCTTTTTCAGAAGACCAAACCGCGCACGCGGATGGCAGCCGTTTTTAGCCCCGATCAGGCAGAAACGGTACGGGTGTTGCAGTACG AAACTGTCACCCACCAGGAATACGGTAAAGAGCCCCAAGCTTGTACCGAAGACTTCGGCATGGAAGCGGCGCGAACAGCTCCCTTCCTCCTGTCCCGAAG TTGTTATGCCAGGCCCTTGGCCTGTTGTAAGTGCTTCAGGACGGAACGGTGGGCACCGTGATGGTGCCCAAATAAATATAGAATGTGGAGACAACCCCCC
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| DNA Sequence for Gene |
>D109_RS0104420
ATGCAAACCGACACAACTCGCGAGAACCCGCAAGGCTCCGTGCCGCAGGCCGCTGATTCGAACCTGGATCTGTCCGCCACCGCGCCCGGCCAACTGCGTG TGATCAAGCGTAACGGCACTGTCGTTCCTTACACCGATGACAAAATCACCGTCGCGATCACCAAAGCGTTTCTTGCAGTTGAAGGCGGCACCGCTGCTGC CTCGTCGCGCATCCACGACACCGTTGCGCGCCTGACCGAACAGGTCACCGCAACGTTCAAGCGTCGCATGCCATCGGGCGGCACCATCCACATCGAAGAA ATCCAGGACCAGGTCGAACTGGCCCTGATGCGTGCCGGCGAGCAAAAAGTTGCCCGCGACTACGTGATCTACCGTGACTCCCGCGCCAAGGAACGCGCCG TACGCTCCCCGGCCGAAGAAGCTGCCGTACAAGCTCACCCGTCGATCCGCATCACCCTGGCCGACGGTACGTTCGCACCACTGGACCTGGGCCGCCTGAA CACCATCATCACCGAGGCCTGCGAAGGCCTGGAAGAAGTCGATGGCGACCTGATCCAGCGCGAAACCCTGAAGAACCTGTACGACGGCGTGGCCCTGACC GACGTCAACACCGCCCTGGTGATGACCGCCCGTACCCTGGTTGAGCGTGAGCCGAACTACTCGTTCGTGACCGCGCGCCTGCTGATGGACACCCTGCGTG CCGAAGGCCTGGGCTTCCTCGGCGTCGCCGACAGCGCCACTCACCACGAGATGGCCGACCTGTATGCCAAGGCCCTGCCGGCGTACATCGCCAAGGGTAT TGAATTCGAATTGCTGAACCCGATCCTGGCCACCTTCGACCTGGAAAAACTCGGCAAGGCGATCAACCACGAGCGCGACCAGCAGTTCACCTACCTGGGC CTGCAAACCCTGTACGACCGTTACTTCATCCACAAGGACGGGATCCGCTTCGAACTGCCGCAAGTGTTCTTCATGCGCGTGGCCATGGGCCTGGCGATCG AAGAGAAGCAGAAAGAAGACCGTGCCATCGAGTTCTACAACCTGTTGTCGTCCTTCGACTACATGTCGTCGACTCCAACACTGTTCAACGCCGGCACCCT GCGTCCACAGCTGTCCAGCTGCTACCTGACCACCGTGCCGGATGACCTGTCGGGCATCTACCACGCGATCCACGACAACGCCATGCTGTCCAAATTCGCG GGCGGCCTGGGTAACGACTGGACGCCGGTGCGTGCGCTGGGTTCGTACATCAAGGGCACCAACGGCAAGTCCCAAGGCGTTGTACCGTTCCTCAAAGTAG TGAACGACACCGCTGTAGCCGTGAACCAGGGTGGCAAGCGCAAAGGCGCTGTGTGTGCCTACCTGGAAACCTGGCACATGGACATCGAAGAGTTCATCGA ACTGCGCAAGAACACCGGTGATGATCGTCGTCGTACCCACGACATGAACACCGCCAACTGGATCCCTGACCTGTTCATGAAGCGTGTCTTCGATGACGGC CCGTGGACCCTGTTCTCGCCATCCGAAGTGCCCGACCTGCACGACCTGACCGGCAAGGCCTTCGAAGAGCGTTACGAGTACTACGAAGCCCTGTCCCAGT ACCCGGGCAAGATCAAGCTGTTCAAGACCATCCAGGCCAAAGACCTGTGGCGCAAAATGCTGTCCATGCTGTTTGAAACCGGCCACCCATGGCTGACCTT CAAAGACCCGTGCAACCTGCGCAGCCCGCAGCAGCACGTGGGCGTGGTCCACAGCTCGAACCTGTGCACCGAGATCACCTTGAACACCAACAAGGACGAG ATCGCCGTTTGCAACCTGGGCTCGATCAACCTGCCGAACCACATCGTCAACGGCAAGCTGGACACCGCCAAGCTGGAACGCACCGTGAACACCGCCGTTC GCATGCTCGATAACGTTATCGACATCAACTACTACTCGGTACCACAGGCGCAGAACTCCAACTTCAAGCACCGTCCGGTGGGCCTGGGCATCATGGGCTT CCAGGACGCGCTGTACCTGCAGCACATTCCTTACGGTTCGGACGCAGCAGTCGAGTTCGCCGACAAGTCCATGGAAGCGGTCAGCTACTACGCGATCCAG GCTTCCTGCGACCTGGCCGACGAGCGCGGCGCCTACGAGACGTTCCAGGGTTCGCTGTGGTCCAAAGGCATCCTGCCGCTGGATTCGCAACAGATCCTGA TCGAGCAGCGTGGCCAGAAGTACATCGACGTTGACCTGAACGAATCCCTGGACTGGGCACCGGTACGTGCCCGTGTGCAGAAAGGCATTCGTAACTCCAA CATCATGGCCATCGCACCGACCGCCACCATCGCCAACATCACTGGCGTGTCGCAGTCGATCGAACCGACCTACCAGAACCTGTATGTGAAATCGAACCTG TCGGGCGAATTCACCGTGATCAACCCGTACCTGGTTCGCGACCTGAAAGCCCGCGGCCTGTGGGACTCGGTGATGATCAACGACCTCAAGTACTACGATG GTTCCGTGCAGCAGATCGAGCGCATCCCGCAAGAACTCAAAGAGCTCTACGCGACTGCCTTCGAAGTGGACACCAAGTGGATCGTTGACGCCGCCAGCCG TCGCCAGAAGTGGATCGACCAGGGTCAGTCGCTGAACCTGTACATCGCCGGCGCATCGGGCAAGAAGCTGGACGTGACCTACCGCATGGCTTGGTACCGT GGCCTGAAAACCACTTACTACCTCCGTGCCCTGGCCGCCACCAGCACCGAGAAGTCGACCATCAACACCGGCAAGCTGAACGCTGTTTCCAGCGGCGGCA ACCACGGTGATGATTCGGTTCTCGCAGCACCTGCCGGTCCGGCGCCAGTGCCAAAAGCCTGCGCGATCGACGAGCCGGATTGCGAAGCTTGCCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTGAGCCCCCCCTTGGGTTTAACCACCCAAGGCTGAACAACCCCCGACAGGCCCATGGCGTATCGGGGGTTTTCTTTTGCCTAGAACAATACTGTCGCG TTGCCCGACTGGGGCACCCCGCCCCGCCGGCCCCATAACTCTATCCGGCCATCGATCACAGCCATCGAGTGACCGCCGTATTCCACCGTCCCCACCTTAC TGCTTCTCAACTCGGCATCAGTGGCGGGCCTGTAACGACCTTTGAGCCCCAAACGATCCAGCCCTTCGCGCGAGGACTCGCCGTTATTGAGGCTGTCCAT CGCCGCCTGGAAACTCCTCCCGGCCGTGCCGTCGTTGTTTTCCATCTGCGCCCGCTTGGCACTCGCGGCGTACATGAAGTTGGCATCGGTCATCATGGCG GGATCATCGCCCTTGAAACGAGCCTGCGTGGCCGCCTCTTTCAACTCATCCCTGGACAAAGAAAGCTTGAAACCATCGCGCATGGTCACGTCATAGCCGC
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| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit alpha
MQTDTTRENPQGSVPQAADSNLDLSATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGTAAASSRIHDTVARLTEQVTATFKRRMPSGGTIHIEE IQDQVELALMRAGEQKVARDYVIYRDSRAKERAVRSPAEEAAVQAHPSIRITLADGTFAPLDLGRLNTIITEACEGLEEVDGDLIQRETLKNLYDGVALT DVNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVADSATHHEMADLYAKALPAYIAKGIEFELLNPILATFDLEKLGKAINHERDQQFTYLG LQTLYDRYFIHKDGIRFELPQVFFMRVAMGLAIEEKQKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYHAIHDNAMLSKFA GGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDG PWTLFSPSEVPDLHDLTGKAFEERYEYYEALSQYPGKIKLFKTIQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDE IAVCNLGSINLPNHIVNGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAQNSNFKHRPVGLGIMGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQ ASCDLADERGAYETFQGSLWSKGILPLDSQQILIEQRGQKYIDVDLNESLDWAPVRARVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNL SGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELKELYATAFEVDTKWIVDAASRRQKWIDQGQSLNLYIAGASGKKLDVTYRMAWYR GLKTTYYLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAIDEPDCEACQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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