Pseudomonas sp. PAMC 26793, D109_RS0104420

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00317
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00317
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006260 DNA replication
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00317
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF03477 ATP cone domain IPR005144 ATP-cone domain 151 234 2.3E-6
Pfam PF03477 ATP cone domain IPR005144 ATP-cone domain 33 129 1.8E-18
FunFam G3DSA:3.20.70.20:FF:000009 Ribonucleoside-diphosphate reductase - - 220 917 0.0
PANTHER PTHR11573 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN IPR039718 Ribonucleoside-diphosphate reductase large subunit 153 965 0.0
PRINTS PR01183 Ribonucleotide reductase large chain signature IPR000788 Ribonucleotide reductase large subunit, C-terminal 686 709 7.2E-47
Pfam PF00317 Ribonucleotide reductase, all-alpha domain IPR013509 Ribonucleotide reductase large subunit, N-terminal 295 366 1.0E-21
PRINTS PR01183 Ribonucleotide reductase large chain signature IPR000788 Ribonucleotide reductase large subunit, C-terminal 620 643 7.2E-47
Pfam PF02867 Ribonucleotide reductase, barrel domain IPR000788 Ribonucleotide reductase large subunit, C-terminal 372 908 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 1 21 -
PRINTS PR01183 Ribonucleotide reductase large chain signature IPR000788 Ribonucleotide reductase large subunit, C-terminal 447 466 7.2E-47
CDD cd01679 RNR_I - - 320 909 0.0
SUPERFAMILY SSF51998 PFL-like glycyl radical enzymes - - 371 909 0.0
PRINTS PR01183 Ribonucleotide reductase large chain signature IPR000788 Ribonucleotide reductase large subunit, C-terminal 583 594 7.2E-47
PRINTS PR01183 Ribonucleotide reductase large chain signature IPR000788 Ribonucleotide reductase large subunit, C-terminal 658 680 7.2E-47
PRINTS PR01183 Ribonucleotide reductase large chain signature IPR000788 Ribonucleotide reductase large subunit, C-terminal 762 789 7.2E-47
Gene3D G3DSA:3.20.70.20 - - - 220 917 0.0
SUPERFAMILY SSF48168 R1 subunit of ribonucleotide reductase, N-terminal domain IPR008926 Ribonucleotide reductase R1 subunit, N-terminal 155 370 3.14E-62
NCBIfam TIGR02506 JCVI: ribonucleoside-diphosphate reductase subunit alpha IPR013346 Ribonucleotide reductase, class I, alpha subunit, C-terminal 298 909 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.