Pseudomonas putida S610, EDP1_2096

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 17 131 4.8E-22
SMART SM00267 duf1_3 IPR000160 GGDEF domain 158 334 3.5E-61
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 14 146 1.42E-29
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 165 333 5.0E-50
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 19 131 1.7E-18
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 174 331 1.41E-47
Gene3D G3DSA:3.40.50.2300 - - - 6 153 9.8E-32
CDD cd01949 GGDEF IPR000160 GGDEF domain 172 331 2.01983E-62
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 164 334 2.1E-53
CDD cd17575 REC_WspR-like - - 17 144 1.69341E-83
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 65 334 1.5E-70
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 170 330 1.9E-48
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 154 332 2.8E-58

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.