Pseudomonas putida S610, EDP1_1293 (secB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida S610 EDP1.NODE_1604, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCTCAGCATTCCCCAGGACAAACTGGCCACCCGCATGACCGAGCTCGAAAAGCACAAGGACAAGACCCTGATCGTGGTGGACGCGATGGGTCAACATGC CGGCACCGTGTGCCGCGACCTGCTCAAGGCTGGTTACAACGCTGCCAAGCTCAGCGGTGGCGTTTCCAGCTGGAAAGCCGACAACCTGCCTTTGGTGAAG TGATATGAAACCTGTCATCGTCTATTCCAGCGACTACTGCCCCTACTGCATGCGTGCCAAGTACCTGCTCGAAAGCAAGGGTGTGGCATTCGAGGAAATC AAGGTCGATGGCAAGCCGCAGGTTCGCGCTGAAATGACCCAGAAGGCCGGCCGCACTTCCGTGCCGCAGATCTGGATCGGCAGCACCCATGTTGGTGGCT GCGATGAACTGCATGCCCTGGAGCGCGCCGGTAAGCTCGACGCACTGCTGGCCGACTGATTTTTGCACTGCATTCCCAAACATTAGGATAAGGATCTGCC
DNA Sequence for Gene
>EDP1_1293 |secB
ATGACTGACCAACAGACCACCGGCGCTGCTGCAGAAGACAACAGCCCTCAGTTCTCGATGCAGCGCATCTATGTGCGTGACTTGTCGTTCGAAGCCCCGA AAAGCCCGCAGATCTTCCGTCAGACCTGGGAGCCGAGCGTCGGGCTTGACCTGAACACCAAGCAGAAGGCCCTGGAAGGCGACTTCCACGAAGTAGTCCT GACCCTGTCGGTGACGGTCAAGAACGGTGACGAAGTCGCCTTCATCGCCGAAGTGCAACAGGCGGGTATCTTCCTGATCAAGAACCTGGATGCCGAGTCG ATGAGCCACACCCTGGGTGCGTTCTGCCCGAACATCCTGTTCCCGTATGCGCGCGAAACCCTGGACAGCTTGGTGACCCGTGGCTCGTTCCCGGCCCTGA TGCTGTCGCCGGTCAACTTCGACGCGCTGTATGCGCAAGAAATGCAGCGTATGCAGGAAGCCGGCGAAGCACCCACTGTGCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGCCCGCTTCACGAAAAGCGCCCTTAGTGGCGCTTTTTGTTTGTCTGGCGTACAGCCTCACTCCTGCGGGCCATGGCGCTGTTGCCTGACGCTATGTCA GCTACCGGCGAACCCGTTCTGACGCCAGGCTTCGTATACCGTCACAGCTACCGTGTTGGACAGGTTCAGGCTCCGGCACCCGGGGCGCATGGGCAGTCGC AGCCGTTGTTCGGCGGGCAGGCTGTCCAGCACGTCCGCGGGCAGGCCGCGGCTTTCGGGGCCAAACAGAAACGCATCGCCTGGCTGGTAGGCCACTTCAT GGAAAGGCTGCGAACCCTTGGTCGTGAAGGCGAAGAGCCGTGGCTGGCCTAGGCTTTCCAGGCAGTGCGCCAGGCTCGGGTGGCGCTTGAGCGTGGCATA CTCGTGGTAATCGAGGCCTGCGCGGCGCAAGCGCTTGTCGTCCAGTTCGAAGCTGATGGGCTCGATCAAGTGCAGCGCGCACCCGCTGTTGGCGCACAGG
Amino Acid Sequence
>protein-export chaperone SecB
MTDQQTTGAAAEDNSPQFSMQRIYVRDLSFEAPKSPQIFRQTWEPSVGLDLNTKQKALEGDFHEVVLTLSVTVKNGDEVAFIAEVQQAGIFLIKNLDAES MSHTLGAFCPNILFPYARETLDSLVTRGSFPALMLSPVNFDALYAQEMQRMQEAGEAPTVQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site