Pseudomonas putida S610, EDP1_1293 (secB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015031 protein transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02556
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051082 unfolded protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02556
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0051262 protein tetramerization
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02556
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02556 Preprotein translocase subunit SecB IPR003708 Bacterial protein export chaperone SecB 12 150 1.3E-54
SUPERFAMILY SSF54611 SecB-like IPR035958 SecB-like superfamily 8 149 5.01E-53
PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature IPR003708 Bacterial protein export chaperone SecB 80 100 6.8E-38
PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature IPR003708 Bacterial protein export chaperone SecB 130 148 6.8E-38
NCBIfam TIGR00809 JCVI: protein-export chaperone SecB IPR003708 Bacterial protein export chaperone SecB 13 147 5.7E-54
PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature IPR003708 Bacterial protein export chaperone SecB 104 126 6.8E-38
PANTHER PTHR36918 - IPR003708 Bacterial protein export chaperone SecB 1 157 4.3E-62
PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature IPR003708 Bacterial protein export chaperone SecB 20 37 6.8E-38
Gene3D G3DSA:3.10.420.10 - IPR035958 SecB-like superfamily 1 159 1.8E-56
Hamap MF_00821 Protein-export protein SecB [secB]. IPR003708 Bacterial protein export chaperone SecB 1 152 33.200302

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.